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The map label for this gene is cccB [H]

Identifier: 23099949

GI number: 23099949

Start: 2553120

End: 2553425

Strand: Reverse

Name: cccB [H]

Synonym: OB2494

Alternate gene names: 23099949

Gene position: 2553425-2553120 (Counterclockwise)

Preceding gene: 23099950

Following gene: 23099948

Centisome position: 70.33

GC content: 37.91

Gene sequence:

>306_bases
ATGAAAAAGTGGCTTGTTGCAATGTTGTTAGGAGTTATATTGACATTGGGGGCATGTGGTAATGCTGATAATGATACTGC
TACTGAGAATCTTGAACCAGGTGAAGAAGTCTTCCGCAATAATTGTGCATCCTGTCATGCAAATGATTTATCAGGTAGAG
GAGGTCCATCATTAGTTGATGTTGGTTCTAAATACTCTCAAGATGAAATAGCAGAAATTGTTACAGAAGGTAAAGGAAGT
ATGCCGCCAATGAATGTTGAAGGACAGAACCTAGAAGAATTAACAAATTGGCTTTCAGAGCAATAA

Upstream 100 bases:

>100_bases
AACAATAAGTATAGATGTTTCATTATTAATTTACTTGTTTTTTTATATAACAAAAAGGCTATAATGATACTATACATATT
TGTTGAAAAGAGGGAGTTAT

Downstream 100 bases:

>100_bases
AATCAATAATAGGTATTATAGATCATCCAACCGATTATTATCGGGAGGCTGGTCTATTTTTTTGTATAAATGTTACATAA
TATGTCGAATTGAAATGAAA

Product: cytochrome c551

Products: NA

Alternate protein names: Cytochrome c551 [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKKWLVAMLLGVILTLGACGNADNDTATENLEPGEEVFRNNCASCHANDLSGRGGPSLVDVGSKYSQDEIAEIVTEGKGS
MPPMNVEGQNLEELTNWLSEQ

Sequences:

>Translated_101_residues
MKKWLVAMLLGVILTLGACGNADNDTATENLEPGEEVFRNNCASCHANDLSGRGGPSLVDVGSKYSQDEIAEIVTEGKGS
MPPMNVEGQNLEELTNWLSEQ
>Mature_101_residues
MKKWLVAMLLGVILTLGACGNADNDTATENLEPGEEVFRNNCASCHANDLSGRGGPSLVDVGSKYSQDEIAEIVTEGKGS
MPPMNVEGQNLEELTNWLSEQ

Specific function: Appears to mediate electron flow from the cytochrome b6f complex to an alternative terminal oxidase [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10811; Mature: 10811

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWLVAMLLGVILTLGACGNADNDTATENLEPGEEVFRNNCASCHANDLSGRGGPSLVD
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
VGSKYSQDEIAEIVTEGKGSMPPMNVEGQNLEELTNWLSEQ
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKKWLVAMLLGVILTLGACGNADNDTATENLEPGEEVFRNNCASCHANDLSGRGGPSLVD
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
VGSKYSQDEIAEIVTEGKGSMPPMNVEGQNLEELTNWLSEQ
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7916623 [H]