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The map label for this gene is cggR [H]

Identifier: 23099894

GI number: 23099894

Start: 2494597

End: 2495616

Strand: Reverse

Name: cggR [H]

Synonym: OB2439

Alternate gene names: 23099894

Gene position: 2495616-2494597 (Counterclockwise)

Preceding gene: 23099895

Following gene: 23099893

Centisome position: 68.74

GC content: 38.04

Gene sequence:

>1020_bases
ATGGATTCCATCATTGACTTACAGAAAAAGCTTGTTCCAGAGCTGGTACATGTTATGAAGGAACGTTATTCATTGCTCAA
AAGTGTAGAGTCATTACAGCCTATAGGTAGGCGTAGTTTAGCAGAGAATACGAATTTAACAGAAAGACATGTACGTAGTG
AAATAGATCTTTTACATGCCCAAGGTTTGGTAGAAATTACAACAAAAGGAATGTTTATTACCAAAGAGGGCAAAGTAGTA
TTGGAGCAACTAGCAGCAATGATCGGTGAAATAAGTGGACTCCATGTTTTAGAAAAAAGAATAAAGGAAATATTATCAGT
AGATTCCGTTATTGTGGTTCCTGGTGATAGTGATCAACGTACTTCCATTAAAACAGAAATGGGTAAAGCTACAGTATCGT
ATCTACGTAAAAAACTTACTTCTACTAATACGATTGCTGTAACTGGAGGCAGTACAATCGCTGCTGTAGCAGATGCGATG
ACTCCTCTAACCAAAGATAAGCAGGTACTTTTTGTTCCAGCTCGTGGAGGTATAGGAGAAAAAGTGGAGAATCAAGCTTC
GAGGATTGTATCCGAGATGGCTCGTAAAACAGATGGGGATTATCGCATGTTATATGTGCCTGATCCAATCAGTGATTCAA
CGTATGAAACAATCATGAAAGAGCCCCATATAGTAGAAGCTTTAGAAGTTATAAAGTCTTCAAATATTGTTCTTCATGGA
GTTGGAGATGCATTGAAGATGGCTGAACGACGCCGTTCTTCTGATGAAGTAATGCAGTTGTTGAAAAAGAAGAACGCAGT
AGGTGAAGCATTCGGCTATTATTTTGACGAATTTGGAAATGTAATCTATAAAGTTAAAACAGTAGGAATACAACTCCAAG
ATATTGATGACAAGAAACAGGTCATAACAGTAGCTGGCGGTAGTTCAAAAGCCAAAGCAATCGTCTCTTATTTTAAGCAA
GCGAAAAGCAATATTCTGATCACTGATCAGGGTGCAGCAGAAGAGATATTAAGAGGATAG

Upstream 100 bases:

>100_bases
CGATTGAATTCAAAATAGATTGTGATATAATGAAATTGTCATCGGGACATAATGTAACCATACGGGACGTATTTAGACCC
GGTGAAGGGAGTGCTAGCAG

Downstream 100 bases:

>100_bases
CCTCTTTATATATAATTTAATAAAAATTCTAGGAGGAATTATACATGGCAGTAAAAATAGGTATTAATGGTTTTGGTAGA
ATCGGACGTAATGTATTTCG

Product: gapA operon transcriptional repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MDSIIDLQKKLVPELVHVMKERYSLLKSVESLQPIGRRSLAENTNLTERHVRSEIDLLHAQGLVEITTKGMFITKEGKVV
LEQLAAMIGEISGLHVLEKRIKEILSVDSVIVVPGDSDQRTSIKTEMGKATVSYLRKKLTSTNTIAVTGGSTIAAVADAM
TPLTKDKQVLFVPARGGIGEKVENQASRIVSEMARKTDGDYRMLYVPDPISDSTYETIMKEPHIVEALEVIKSSNIVLHG
VGDALKMAERRRSSDEVMQLLKKKNAVGEAFGYYFDEFGNVIYKVKTVGIQLQDIDDKKQVITVAGGSSKAKAIVSYFKQ
AKSNILITDQGAAEEILRG

Sequences:

>Translated_339_residues
MDSIIDLQKKLVPELVHVMKERYSLLKSVESLQPIGRRSLAENTNLTERHVRSEIDLLHAQGLVEITTKGMFITKEGKVV
LEQLAAMIGEISGLHVLEKRIKEILSVDSVIVVPGDSDQRTSIKTEMGKATVSYLRKKLTSTNTIAVTGGSTIAAVADAM
TPLTKDKQVLFVPARGGIGEKVENQASRIVSEMARKTDGDYRMLYVPDPISDSTYETIMKEPHIVEALEVIKSSNIVLHG
VGDALKMAERRRSSDEVMQLLKKKNAVGEAFGYYFDEFGNVIYKVKTVGIQLQDIDDKKQVITVAGGSSKAKAIVSYFKQ
AKSNILITDQGAAEEILRG
>Mature_339_residues
MDSIIDLQKKLVPELVHVMKERYSLLKSVESLQPIGRRSLAENTNLTERHVRSEIDLLHAQGLVEITTKGMFITKEGKVV
LEQLAAMIGEISGLHVLEKRIKEILSVDSVIVVPGDSDQRTSIKTEMGKATVSYLRKKLTSTNTIAVTGGSTIAAVADAM
TPLTKDKQVLFVPARGGIGEKVENQASRIVSEMARKTDGDYRMLYVPDPISDSTYETIMKEPHIVEALEVIKSSNIVLHG
VGDALKMAERRRSSDEVMQLLKKKNAVGEAFGYYFDEFGNVIYKVKTVGIQLQDIDDKKQVITVAGGSSKAKAIVSYFKQ
AKSNILITDQGAAEEILRG

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=254, Percent_Identity=23.6220472440945, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 37305; Mature: 37305

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIIDLQKKLVPELVHVMKERYSLLKSVESLQPIGRRSLAENTNLTERHVRSEIDLLHA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QGLVEITTKGMFITKEGKVVLEQLAAMIGEISGLHVLEKRIKEILSVDSVIVVPGDSDQR
CCEEEEEECCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCH
TSIKTEMGKATVSYLRKKLTSTNTIAVTGGSTIAAVADAMTPLTKDKQVLFVPARGGIGE
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCH
KVENQASRIVSEMARKTDGDYRMLYVPDPISDSTYETIMKEPHIVEALEVIKSSNIVLHG
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEE
VGDALKMAERRRSSDEVMQLLKKKNAVGEAFGYYFDEFGNVIYKVKTVGIQLQDIDDKKQ
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCE
VITVAGGSSKAKAIVSYFKQAKSNILITDQGAAEEILRG
EEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHCC
>Mature Secondary Structure
MDSIIDLQKKLVPELVHVMKERYSLLKSVESLQPIGRRSLAENTNLTERHVRSEIDLLHA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QGLVEITTKGMFITKEGKVVLEQLAAMIGEISGLHVLEKRIKEILSVDSVIVVPGDSDQR
CCEEEEEECCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCH
TSIKTEMGKATVSYLRKKLTSTNTIAVTGGSTIAAVADAMTPLTKDKQVLFVPARGGIGE
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCH
KVENQASRIVSEMARKTDGDYRMLYVPDPISDSTYETIMKEPHIVEALEVIKSSNIVLHG
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEE
VGDALKMAERRRSSDEVMQLLKKKNAVGEAFGYYFDEFGNVIYKVKTVGIQLQDIDDKKQ
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCE
VITVAGGSSKAKAIVSYFKQAKSNILITDQGAAEEILRG
EEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1452037 [H]