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The map label for this gene is ytxE [H]

Identifier: 23099679

GI number: 23099679

Start: 2262669

End: 2263424

Strand: Reverse

Name: ytxE [H]

Synonym: OB2224

Alternate gene names: 23099679

Gene position: 2263424-2262669 (Counterclockwise)

Preceding gene: 23099680

Following gene: 23099675

Centisome position: 62.34

GC content: 35.32

Gene sequence:

>756_bases
ATGAAGCGTAGATCTATAAGGCATCAGTCGAAAAAAGGTGCTCCAAAGTGGATGGTCACATATTCTGATATGATAACACT
CATTCTAGTATTCTTTATCTTATTATTTTCTATGTCGCAAATTGATCAAACCAAGTTCGATCAAGTAACAGAATCCTTTC
AAAACCGTATGATACTAGATTTCTTGCCTTCAGCTGTACCTTTGGAGAATCCGACAGAAAGTACTGGTGAAAATAGTGAG
GACGGTAAAATCGATGAAATTGAACCAATATATCTCGCTAATGAAGAAGAAGAAAAAAGTACGGATGAACTTGATGAACT
AATGATGAATGTGTCGCAATACTTAGAAGAAAATAATCTTAAAGATGTTATTACTGCGAACAGAAATGAGCGTGGAGTTG
TTCTTGTCTTACAAGAAAAAATATTATTTGAGTCAGGAGAAGCTGAAATATTAGAGGAAGCAGGACCTTTTCTAAATCAT
ATTGGTACCTTGTTAAGTGAATTAGATAATCAAGTAAACGTTGAAGGTCATACCGATTCTAGACCAATATCTAATTATCG
ATACCCTTCTAACTGGGAATTATCCGGTGCAAGAGCCAGTAGCGTTGTTCGTTACTTTATAGAAGCTGAATCGCTTCATA
TGTCAAGGTTTTCAACAGTTGGATATGCTGATACCGTCCCGTTAGAACCAAATTCGAATGAGGCTAATATGAGTAAGAAT
AGGCGTGTGGAAATTATAATATTAGATAATGATTGA

Upstream 100 bases:

>100_bases
CGAATTTTAGAAGAAAAGCTCAGTGCTTTTTTAACTGAAGAGGATATACAAACAGAGAAAAATAAAATAAATGAAAAGTC
CTACGCTGGAGAAAAGTTAA

Downstream 100 bases:

>100_bases
AAAATTATAGTCGAAGGAGAATCAGTTAATAGAAAAAAAGATAGAGTAAAGATAGACGGCTCGTAGATATCTTGTTTTCT
CACAAACAGAAAGGGGGGAG

Product: flagellar motor protein MotS

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKRRSIRHQSKKGAPKWMVTYSDMITLILVFFILLFSMSQIDQTKFDQVTESFQNRMILDFLPSAVPLENPTESTGENSE
DGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNLKDVITANRNERGVVLVLQEKILFESGEAEILEEAGPFLNH
IGTLLSELDNQVNVEGHTDSRPISNYRYPSNWELSGARASSVVRYFIEAESLHMSRFSTVGYADTVPLEPNSNEANMSKN
RRVEIIILDND

Sequences:

>Translated_251_residues
MKRRSIRHQSKKGAPKWMVTYSDMITLILVFFILLFSMSQIDQTKFDQVTESFQNRMILDFLPSAVPLENPTESTGENSE
DGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNLKDVITANRNERGVVLVLQEKILFESGEAEILEEAGPFLNH
IGTLLSELDNQVNVEGHTDSRPISNYRYPSNWELSGARASSVVRYFIEAESLHMSRFSTVGYADTVPLEPNSNEANMSKN
RRVEIIILDND
>Mature_251_residues
MKRRSIRHQSKKGAPKWMVTYSDMITLILVFFILLFSMSQIDQTKFDQVTESFQNRMILDFLPSAVPLENPTESTGENSE
DGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNLKDVITANRNERGVVLVLQEKILFESGEAEILEEAGPFLNH
IGTLLSELDNQVNVEGHTDSRPISNYRYPSNWELSGARASSVVRYFIEAESLHMSRFSTVGYADTVPLEPNSNEANMSKN
RRVEIIILDND

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=260, Percent_Identity=22.3076923076923, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 28690; Mature: 28690

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSIRHQSKKGAPKWMVTYSDMITLILVFFILLFSMSQIDQTKFDQVTESFQNRMILD
CCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHH
FLPSAVPLENPTESTGENSEDGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
KDVITANRNERGVVLVLQEKILFESGEAEILEEAGPFLNHIGTLLSELDNQVNVEGHTDS
HHHHCCCCCCCCEEEEEEHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCC
RPISNYRYPSNWELSGARASSVVRYFIEAESLHMSRFSTVGYADTVPLEPNSNEANMSKN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RRVEIIILDND
CEEEEEEEECC
>Mature Secondary Structure
MKRRSIRHQSKKGAPKWMVTYSDMITLILVFFILLFSMSQIDQTKFDQVTESFQNRMILD
CCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHH
FLPSAVPLENPTESTGENSEDGKIDEIEPIYLANEEEEKSTDELDELMMNVSQYLEENNL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
KDVITANRNERGVVLVLQEKILFESGEAEILEEAGPFLNHIGTLLSELDNQVNVEGHTDS
HHHHCCCCCCCCEEEEEEHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCC
RPISNYRYPSNWELSGARASSVVRYFIEAESLHMSRFSTVGYADTVPLEPNSNEANMSKN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RRVEIIILDND
CEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]