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The map label for this gene is yshB [H]

Identifier: 23099581

GI number: 23099581

Start: 2161912

End: 2162451

Strand: Reverse

Name: yshB [H]

Synonym: OB2126

Alternate gene names: 23099581

Gene position: 2162451-2161912 (Counterclockwise)

Preceding gene: 23099582

Following gene: 23099580

Centisome position: 59.56

GC content: 33.15

Gene sequence:

>540_bases
ATGTTAGATATATTATTATTTTTACTTTTGATTTTCGGTTTTTTAATGGGATTGAAGCGTGGATTTATTCTTCAATTACT
CCATTTAACGGGATTTATTGTTGCTTTTGTCTTGGCCGTGATGTATTACAAGCCACTAGGTGAACAATTAGCATTGTTTA
TCCCATATCCGGAGTTGTCCAGTGATAGTTCATGGGCAAACTTTTTACAGTCATTACCGCTTGAAGGCGCGTTCTATAAT
GCAATAGCGTTTGCGCTTATTTTTATTGCGGTGCGCGTAATCTTACAAATAATTGCTTCCATGTTAGATTTTGTAGCATC
CATACCTATTATTAGTTCAATTAATAAGTTATTAGGTGCAGTATTAGGATTTGTTGAGATCTATTTGCTGTCTTTTATTT
TGTTATTTATTTTAGCATTAACTCCACTTGGTGGAGTTCAAGAGGCAATACAACAATCATCGATTGCTTTATTTATGATT
GAAAAAACACCATACTTCTCGGAGAAAATAATGGAACTATGGTTTTCAATTGGAAATTAG

Upstream 100 bases:

>100_bases
AGTCTTAACTGCAGTAAACACAATGAATGATTATCTAAAACTAAAAGAAGATTATGCAACGCTTTTAGGATCGATAAAGA
AGAAAGAGGATTAAAACCAT

Downstream 100 bases:

>100_bases
AAAAAGCTAAATAGTAACTAAACGCACTGACTCATGTTGATCGGGAGGCTTAACGAGTACATCCTAGAAAATTGCGTGAG
TCAGTTTGTTTTTTATAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLDILLFLLLIFGFLMGLKRGFILQLLHLTGFIVAFVLAVMYYKPLGEQLALFIPYPELSSDSSWANFLQSLPLEGAFYN
AIAFALIFIAVRVILQIIASMLDFVASIPIISSINKLLGAVLGFVEIYLLSFILLFILALTPLGGVQEAIQQSSIALFMI
EKTPYFSEKIMELWFSIGN

Sequences:

>Translated_179_residues
MLDILLFLLLIFGFLMGLKRGFILQLLHLTGFIVAFVLAVMYYKPLGEQLALFIPYPELSSDSSWANFLQSLPLEGAFYN
AIAFALIFIAVRVILQIIASMLDFVASIPIISSINKLLGAVLGFVEIYLLSFILLFILALTPLGGVQEAIQQSSIALFMI
EKTPYFSEKIMELWFSIGN
>Mature_179_residues
MLDILLFLLLIFGFLMGLKRGFILQLLHLTGFIVAFVLAVMYYKPLGEQLALFIPYPELSSDSSWANFLQSLPLEGAFYN
AIAFALIFIAVRVILQIIASMLDFVASIPIISSINKLLGAVLGFVEIYLLSFILLFILALTPLGGVQEAIQQSSIALFMI
EKTPYFSEKIMELWFSIGN

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 19979; Mature: 19979

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDILLFLLLIFGFLMGLKRGFILQLLHLTGFIVAFVLAVMYYKPLGEQLALFIPYPELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCC
SDSSWANFLQSLPLEGAFYNAIAFALIFIAVRVILQIIASMLDFVASIPIISSINKLLGA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGFVEIYLLSFILLFILALTPLGGVQEAIQQSSIALFMIEKTPYFSEKIMELWFSIGN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDILLFLLLIFGFLMGLKRGFILQLLHLTGFIVAFVLAVMYYKPLGEQLALFIPYPELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCC
SDSSWANFLQSLPLEGAFYNAIAFALIFIAVRVILQIIASMLDFVASIPIISSINKLLGA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGFVEIYLLSFILLFILALTPLGGVQEAIQQSSIALFMIEKTPYFSEKIMELWFSIGN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]