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The map label for this gene is tsr [C]

Identifier: 23099557

GI number: 23099557

Start: 2135472

End: 2137469

Strand: Reverse

Name: tsr [C]

Synonym: OB2102

Alternate gene names: 23099557

Gene position: 2137469-2135472 (Counterclockwise)

Preceding gene: 23099558

Following gene: 23099556

Centisome position: 58.87

GC content: 34.68

Gene sequence:

>1998_bases
TTGAAGAAGAAAAAAAGAATCAAGAAATCACTTAGTTTAAGAAATAGATTAATAATAGCGTTTCTTATCATATTATTAAT
CCCTAGTATTGCAATAGGATTAACCTCATATCAAAGCGCAAAGAATAAGATTGAGGAAAGTATGATAGACTCTGCACAAA
AGAACGTAGAAATTATGAAACAAACTATTGATCAGTTTATGAATGATCAAATGGATAACATCGAATACTTATCTACTGCA
ATTGATCCATCGGATATAGAAGATAATGCAGATGAAGCTACAGGCAGAATCTTAGAAAATATGCAAAATGCAAAAGATGT
AGTCTTTGAACAAACATATGTAGGGTCAGAGACGGGAGAATTCATGAACTTCCCTACATCCTTTAAAAACCCATCCGATT
ATGATCCAAGAGAGCGACCTTGGTATCAACAAGCGATGGAAAATCAAGGCGAAGTAATCGTAACAACTCCTTACGTATCA
GCTTCTTCTAATCAAGTGGTTGTAACACTTGCGAAAGCTACTGCAAATAATGATGGTGTTGTAGCAGTAAACTTAGAGTT
AGCTAGTTTAACAAATATAGTTAATTCAGTCGCTATCGGGGAAGAAGGGTATATGTTTCTATTAGATGAAGGACAAAGCT
ATATTAGTCACCCCGATTATGAGGCTGGTTCTGAAGCGGTAGAAGATTTTTTCTCCAAGCTATACGACTCGGAAAATGGA
AAATTCAGCTATCAATTTGAAGGTGATGACAAACAATTGGCATTTGCTACAAGTGAAATTACAGGTTGGAAAATAGCTGG
AACCATGTTTAATAGTGAAATAGCCTATAATGTGAGCCCAATTTTAAATACGACAATCTTTGTTATAACGGTTGCATTAA
TTCTTGGAGGGGTAGTAATTGTCATTATTATTCGTTCTATTTCGAAACCGATATATCATCTTGTAAGTGCAAGTGATACG
ATAAGTCATGGAGATTTAAGCGATGAGGTACACCTCCATCGAGATGATGAATTAGGTACACTAGCTCAATCATTTAATAA
AATGCGAGAAAATTTGAATGGAATTATCCTTCAAGTTAGAGATAAATCAAATCATTTAGCATCCTCAGCTGAACAATTAA
ATGCCAGTACCGAACAAAATACATCAGCAACAGAGCAAATTTCTTCTTCTGTACAAGAAGTAGCTGAGGGTATGAGTAGT
TTAAATAACAATATAACAAAGAGCTCCAAATTAGCGAAGGAAATGACAGATTCTATTTATACGATAGAAGCAAGTTCGAA
TGAAGTTTCAAATACTGTTACCAATACCATTTCAGCTGTTAATGAAGGTAACAAAGCATTGAATACTACAATTAGTCAAA
TGGAATTTATCAAAGAGAATACACATCAGCTATCCAATAATATTGAAGGTTTAGGCAATCAATCAGAAGAAATCAGCAAA
ATTATTGATGTTATTACGGATATTTCTGAGCAAACAAACTTATTAGCTCTTAATGCTACAATCGAAGCAGCAAGAGCCGG
AGAGCATGGGAAAGGATTTGCTGTGGTAGCTGATGAGGTAAGAAAACTTGCTGAAAAATCTTCCCAATCAGCAGAGCAAA
TTAAGACAATGATTAGCGCTATTCAATCGGAAACTGCGAATACGGTGAGTTCGATGAAAGCTGCAACAACAGAGGTTGAA
AAAGGGATTAATATTGCTAATAATGCAGATCAATCTTTCTCAAATATTACTGGATATGTAGATTCTATAACGAATCAAAT
CATGAATGTAACAACTGAAATTGAAGGAATATCAACGGCAACGAAACAATTTACTTCTCTTTTTGAAGGTGTGGCCTCCA
TTGGTGATACAGTATCACATGAAGCCGAAAATGTTTCAGCATCTACACAAGAACAGCTTGCTTCAATGGAAGAAATTGCA
AATTCAGCGGCAGATTTAACTACTGTAGCAGAAGACTTACAACAATTAGTAGAGAATTTTAAGCTATCTAGAAATTAA

Upstream 100 bases:

>100_bases
TTTTATGATTAGTTTTATTTTTAAACTTGCTGTTAAGTTCTAGTGCTTTTGGTCGATATAAAGTTCATAATTGCACAAAC
TTATAGCAGGAGGTAACACA

Downstream 100 bases:

>100_bases
ATAACACGTCATTACACTAAAGTACGAGGATGCGGTTCATATATGGACCGCATCCTCGTTTCTTTAGGGCTGTTTATTAG
ATATTTCTCTACGGGTTTCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MKKKKRIKKSLSLRNRLIIAFLIILLIPSIAIGLTSYQSAKNKIEESMIDSAQKNVEIMKQTIDQFMNDQMDNIEYLSTA
IDPSDIEDNADEATGRILENMQNAKDVVFEQTYVGSETGEFMNFPTSFKNPSDYDPRERPWYQQAMENQGEVIVTTPYVS
ASSNQVVVTLAKATANNDGVVAVNLELASLTNIVNSVAIGEEGYMFLLDEGQSYISHPDYEAGSEAVEDFFSKLYDSENG
KFSYQFEGDDKQLAFATSEITGWKIAGTMFNSEIAYNVSPILNTTIFVITVALILGGVVIVIIIRSISKPIYHLVSASDT
ISHGDLSDEVHLHRDDELGTLAQSFNKMRENLNGIILQVRDKSNHLASSAEQLNASTEQNTSATEQISSSVQEVAEGMSS
LNNNITKSSKLAKEMTDSIYTIEASSNEVSNTVTNTISAVNEGNKALNTTISQMEFIKENTHQLSNNIEGLGNQSEEISK
IIDVITDISEQTNLLALNATIEAARAGEHGKGFAVVADEVRKLAEKSSQSAEQIKTMISAIQSETANTVSSMKAATTEVE
KGINIANNADQSFSNITGYVDSITNQIMNVTTEIEGISTATKQFTSLFEGVASIGDTVSHEAENVSASTQEQLASMEEIA
NSAADLTTVAEDLQQLVENFKLSRN

Sequences:

>Translated_665_residues
MKKKKRIKKSLSLRNRLIIAFLIILLIPSIAIGLTSYQSAKNKIEESMIDSAQKNVEIMKQTIDQFMNDQMDNIEYLSTA
IDPSDIEDNADEATGRILENMQNAKDVVFEQTYVGSETGEFMNFPTSFKNPSDYDPRERPWYQQAMENQGEVIVTTPYVS
ASSNQVVVTLAKATANNDGVVAVNLELASLTNIVNSVAIGEEGYMFLLDEGQSYISHPDYEAGSEAVEDFFSKLYDSENG
KFSYQFEGDDKQLAFATSEITGWKIAGTMFNSEIAYNVSPILNTTIFVITVALILGGVVIVIIIRSISKPIYHLVSASDT
ISHGDLSDEVHLHRDDELGTLAQSFNKMRENLNGIILQVRDKSNHLASSAEQLNASTEQNTSATEQISSSVQEVAEGMSS
LNNNITKSSKLAKEMTDSIYTIEASSNEVSNTVTNTISAVNEGNKALNTTISQMEFIKENTHQLSNNIEGLGNQSEEISK
IIDVITDISEQTNLLALNATIEAARAGEHGKGFAVVADEVRKLAEKSSQSAEQIKTMISAIQSETANTVSSMKAATTEVE
KGINIANNADQSFSNITGYVDSITNQIMNVTTEIEGISTATKQFTSLFEGVASIGDTVSHEAENVSASTQEQLASMEEIA
NSAADLTTVAEDLQQLVENFKLSRN
>Mature_665_residues
MKKKKRIKKSLSLRNRLIIAFLIILLIPSIAIGLTSYQSAKNKIEESMIDSAQKNVEIMKQTIDQFMNDQMDNIEYLSTA
IDPSDIEDNADEATGRILENMQNAKDVVFEQTYVGSETGEFMNFPTSFKNPSDYDPRERPWYQQAMENQGEVIVTTPYVS
ASSNQVVVTLAKATANNDGVVAVNLELASLTNIVNSVAIGEEGYMFLLDEGQSYISHPDYEAGSEAVEDFFSKLYDSENG
KFSYQFEGDDKQLAFATSEITGWKIAGTMFNSEIAYNVSPILNTTIFVITVALILGGVVIVIIIRSISKPIYHLVSASDT
ISHGDLSDEVHLHRDDELGTLAQSFNKMRENLNGIILQVRDKSNHLASSAEQLNASTEQNTSATEQISSSVQEVAEGMSS
LNNNITKSSKLAKEMTDSIYTIEASSNEVSNTVTNTISAVNEGNKALNTTISQMEFIKENTHQLSNNIEGLGNQSEEISK
IIDVITDISEQTNLLALNATIEAARAGEHGKGFAVVADEVRKLAEKSSQSAEQIKTMISAIQSETANTVSSMKAATTEVE
KGINIANNADQSFSNITGYVDSITNQIMNVTTEIEGISTATKQFTSLFEGVASIGDTVSHEAENVSASTQEQLASMEEIA
NSAADLTTVAEDLQQLVENFKLSRN

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=255, Percent_Identity=32.156862745098, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1788195, Length=283, Percent_Identity=28.2685512367491, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1789453, Length=369, Percent_Identity=25.7452574525745, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787690, Length=387, Percent_Identity=27.1317829457364, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788194, Length=379, Percent_Identity=28.7598944591029, Blast_Score=106, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72582; Mature: 72582

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKRIKKSLSLRNRLIIAFLIILLIPSIAIGLTSYQSAKNKIEESMIDSAQKNVEIMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTIDQFMNDQMDNIEYLSTAIDPSDIEDNADEATGRILENMQNAKDVVFEQTYVGSETGE
HHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FMNFPTSFKNPSDYDPRERPWYQQAMENQGEVIVTTPYVSASSNQVVVTLAKATANNDGV
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCEECCCCEEEEEEEECCCCCCCE
VAVNLELASLTNIVNSVAIGEEGYMFLLDEGQSYISHPDYEAGSEAVEDFFSKLYDSENG
EEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCCCC
KFSYQFEGDDKQLAFATSEITGWKIAGTMFNSEIAYNVSPILNTTIFVITVALILGGVVI
EEEEEECCCCCEEEEEECCCCCEEEEHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
VIIIRSISKPIYHLVSASDTISHGDLSDEVHLHRDDELGTLAQSFNKMRENLNGIILQVR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEE
DKSNHLASSAEQLNASTEQNTSATEQISSSVQEVAEGMSSLNNNITKSSKLAKEMTDSIY
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEE
TIEASSNEVSNTVTNTISAVNEGNKALNTTISQMEFIKENTHQLSNNIEGLGNQSEEISK
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IIDVITDISEQTNLLALNATIEAARAGEHGKGFAVVADEVRKLAEKSSQSAEQIKTMISA
HHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IQSETANTVSSMKAATTEVEKGINIANNADQSFSNITGYVDSITNQIMNVTTEIEGISTA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKQFTSLFEGVASIGDTVSHEAENVSASTQEQLASMEEIANSAADLTTVAEDLQQLVENF
HHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KLSRN
CCCCC
>Mature Secondary Structure
MKKKKRIKKSLSLRNRLIIAFLIILLIPSIAIGLTSYQSAKNKIEESMIDSAQKNVEIMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTIDQFMNDQMDNIEYLSTAIDPSDIEDNADEATGRILENMQNAKDVVFEQTYVGSETGE
HHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FMNFPTSFKNPSDYDPRERPWYQQAMENQGEVIVTTPYVSASSNQVVVTLAKATANNDGV
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCEECCCCEEEEEEEECCCCCCCE
VAVNLELASLTNIVNSVAIGEEGYMFLLDEGQSYISHPDYEAGSEAVEDFFSKLYDSENG
EEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHCCCCC
KFSYQFEGDDKQLAFATSEITGWKIAGTMFNSEIAYNVSPILNTTIFVITVALILGGVVI
EEEEEECCCCCEEEEEECCCCCEEEEHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
VIIIRSISKPIYHLVSASDTISHGDLSDEVHLHRDDELGTLAQSFNKMRENLNGIILQVR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEE
DKSNHLASSAEQLNASTEQNTSATEQISSSVQEVAEGMSSLNNNITKSSKLAKEMTDSIY
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEE
TIEASSNEVSNTVTNTISAVNEGNKALNTTISQMEFIKENTHQLSNNIEGLGNQSEEISK
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IIDVITDISEQTNLLALNATIEAARAGEHGKGFAVVADEVRKLAEKSSQSAEQIKTMISA
HHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IQSETANTVSSMKAATTEVEKGINIANNADQSFSNITGYVDSITNQIMNVTTEIEGISTA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKQFTSLFEGVASIGDTVSHEAENVSASTQEQLASMEEIANSAADLTTVAEDLQQLVENF
HHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KLSRN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA