Click here to switch to the map view.

The map label for this gene is yneB [H]

Identifier: 23099125

GI number: 23099125

Start: 1711630

End: 1712268

Strand: Direct

Name: yneB [H]

Synonym: OB1670

Alternate gene names: 23099125

Gene position: 1711630-1712268 (Clockwise)

Preceding gene: 23099120

Following gene: 23099126

Centisome position: 47.15

GC content: 36.78

Gene sequence:

>639_bases
TTGAAAGCAGTAGTATATTGTCGAGTTAGTACGGATAAACATACCCAAGAGTCATCCCTAATACGCCAACGAGAGGAATT
GCAAACATTAGCAAGTAAGCTAGACTTTACGATTGTTGATTGTATCGAAGAACAAGCAAGCGGATACGATATCGAACGGG
AAGGACTTTTTCAACTTCTTGAATATTTTTCCAGTAAAGAAGCGGATTGTTTATGTATTCAAGATGAAACTCGATTAGGG
AGAGGGAATACAAAAATTGCACTTTTTCATCAATTAGGCAAACTGAATATTCCTATCTACACAGTTGCTCACGAAGGTGA
GTTAGTATTAAATGAAGCGGATTCGATGGTATTACAAATTGTGGGTATTGTAGAAGAATACCAGAGAAAAATACAAAATA
TGAAAATAAAAAGAGGAATGCGAAGAGCGGTACGCGAGGGATATCGGCCGGAAAAAAATCTGAAACAAATCGACCAGTCT
CCCGGTAGAGATCGATCCGAACTACCTATAGAAGAAATTGTTCGATTAAGACAAAACGAGCTAACATTTAATGAAATTAC
AAAGGTACTAAATGGTTTAGGTTACAACGTTTCGAAAGCTACTGTACACCGTAGATACCAAGAATATCAAAATACTTGA

Upstream 100 bases:

>100_bases
GAACCGATGCTTTCTATGTGGTAGCATTTGCCTTTAGCGCTCGCTTTTTTATATTTCTCTATGGTAACGAGCGGTTAATT
GAAACAGGAGGAAGTTAGGA

Downstream 100 bases:

>100_bases
ATCTGAAATCCAGGTAGAGTACGATAAAAGTCAGGATGTGAAATCCTGTCTTTTTTTATTTTAATTGCGGGGAGGTAGAC
ACCATGTTATCTAAGGATAA

Product: resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKAVVYCRVSTDKHTQESSLIRQREELQTLASKLDFTIVDCIEEQASGYDIEREGLFQLLEYFSSKEADCLCIQDETRLG
RGNTKIALFHQLGKLNIPIYTVAHEGELVLNEADSMVLQIVGIVEEYQRKIQNMKIKRGMRRAVREGYRPEKNLKQIDQS
PGRDRSELPIEEIVRLRQNELTFNEITKVLNGLGYNVSKATVHRRYQEYQNT

Sequences:

>Translated_212_residues
MKAVVYCRVSTDKHTQESSLIRQREELQTLASKLDFTIVDCIEEQASGYDIEREGLFQLLEYFSSKEADCLCIQDETRLG
RGNTKIALFHQLGKLNIPIYTVAHEGELVLNEADSMVLQIVGIVEEYQRKIQNMKIKRGMRRAVREGYRPEKNLKQIDQS
PGRDRSELPIEEIVRLRQNELTFNEITKVLNGLGYNVSKATVHRRYQEYQNT
>Mature_212_residues
MKAVVYCRVSTDKHTQESSLIRQREELQTLASKLDFTIVDCIEEQASGYDIEREGLFQLLEYFSSKEADCLCIQDETRLG
RGNTKIALFHQLGKLNIPIYTVAHEGELVLNEADSMVLQIVGIVEEYQRKIQNMKIKRGMRRAVREGYRPEKNLKQIDQS
PGRDRSELPIEEIVRLRQNELTFNEITKVLNGLGYNVSKATVHRRYQEYQNT

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006119 [H]

Pfam domain/function: PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 24612; Mature: 24612

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVVYCRVSTDKHTQESSLIRQREELQTLASKLDFTIVDCIEEQASGYDIEREGLFQLL
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHH
EYFSSKEADCLCIQDETRLGRGNTKIALFHQLGKLNIPIYTVAHEGELVLNEADSMVLQI
HHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEHHHHHHHHH
VGIVEEYQRKIQNMKIKRGMRRAVREGYRPEKNLKQIDQSPGRDRSELPIEEIVRLRQNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
LTFNEITKVLNGLGYNVSKATVHRRYQEYQNT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAVVYCRVSTDKHTQESSLIRQREELQTLASKLDFTIVDCIEEQASGYDIEREGLFQLL
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHH
EYFSSKEADCLCIQDETRLGRGNTKIALFHQLGKLNIPIYTVAHEGELVLNEADSMVLQI
HHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEHHHHHHHHH
VGIVEEYQRKIQNMKIKRGMRRAVREGYRPEKNLKQIDQSPGRDRSELPIEEIVRLRQNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
LTFNEITKVLNGLGYNVSKATVHRRYQEYQNT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]