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The map label for this gene is ylmH [H]

Identifier: 23098937

GI number: 23098937

Start: 1520829

End: 1521605

Strand: Direct

Name: ylmH [H]

Synonym: OB1482

Alternate gene names: 23098937

Gene position: 1520829-1521605 (Clockwise)

Preceding gene: 23098936

Following gene: 23098938

Centisome position: 41.89

GC content: 32.56

Gene sequence:

>777_bases
ATGGAAGTTTATCAACATTTTCGTAAAGAAGAACAGCCTTTTATTGATCAAGTTTTTTCTTGGAAAGAGCAAGTAGAACG
TTCTTTTATCCCAAAGCTAACGGATTTTCTTGACCCTCGTGAGCAAGAAATAGTCACTTCGTTGATTGGAGAACATAATG
AGGAACTTCAGGTAAGAGGTTTTGGTGGAAGTAACAAGAGTGAACGAAGTAGAATGATTTTAGCTCCAAAGTATGAAGAG
ATTACAGAAGATATGTTTCAAATTCAACTACTCGAAGCAAATTTCCAACCAAAATTTGTAATGATAGAACATCCAGATGT
AATGGGAGCTTTTTTATCACAAGGAATTAAGCGAAAAAAACTCGGTGATATTATAATTGAGGATGGTAAGATACAGATTA
TAGCCGCTTCAGAAATTTCCCCATTTGTACAAATGAATTTAACATCGATTAGAAAATCATCTGTACACTTTGAACAAAAG
GACCTGCAATTACTCATTAAAAAAAATGAAACATGGATTGAACGTGATAAGACCGTATCTTCTCTTCGTTTAGATACAGT
TATTAAAGAGATTTATCCACTATCACGAAAAGAAGCAACTGTTTTTATTCAAAAAGGATTAGTGAAAGTGAACTATAAGT
TAGTCGATGACAATAAATTTCAGTTGCAAGAAAAAGACATGATTTCGATTCGAGGTCATGGTAGAAGTAAGCTTACATCT
ATAAGAGGAAAATCAAAAAAAGATAAAGTGAAAATAACAATTGCTACACTCAAATAA

Upstream 100 bases:

>100_bases
TTGATTTATCTCCAATCGTTGCAATTATAGTACTTAATCTTGCACGTCAAGGAATTTTTGAGTTTTTCCGAATGTTCATT
TATTAAGGAAAGGAATTATA

Downstream 100 bases:

>100_bases
TGGTATAATTAATGCAGGAATTATTGTTTATTTGTCGAATTAATGTGTAATAAGGATTTTTAAGTATTTATATCGCTAAG
GAGGTGACGATGGTGGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MEVYQHFRKEEQPFIDQVFSWKEQVERSFIPKLTDFLDPREQEIVTSLIGEHNEELQVRGFGGSNKSERSRMILAPKYEE
ITEDMFQIQLLEANFQPKFVMIEHPDVMGAFLSQGIKRKKLGDIIIEDGKIQIIAASEISPFVQMNLTSIRKSSVHFEQK
DLQLLIKKNETWIERDKTVSSLRLDTVIKEIYPLSRKEATVFIQKGLVKVNYKLVDDNKFQLQEKDMISIRGHGRSKLTS
IRGKSKKDKVKITIATLK

Sequences:

>Translated_258_residues
MEVYQHFRKEEQPFIDQVFSWKEQVERSFIPKLTDFLDPREQEIVTSLIGEHNEELQVRGFGGSNKSERSRMILAPKYEE
ITEDMFQIQLLEANFQPKFVMIEHPDVMGAFLSQGIKRKKLGDIIIEDGKIQIIAASEISPFVQMNLTSIRKSSVHFEQK
DLQLLIKKNETWIERDKTVSSLRLDTVIKEIYPLSRKEATVFIQKGLVKVNYKLVDDNKFQLQEKDMISIRGHGRSKLTS
IRGKSKKDKVKITIATLK
>Mature_258_residues
MEVYQHFRKEEQPFIDQVFSWKEQVERSFIPKLTDFLDPREQEIVTSLIGEHNEELQVRGFGGSNKSERSRMILAPKYEE
ITEDMFQIQLLEANFQPKFVMIEHPDVMGAFLSQGIKRKKLGDIIIEDGKIQIIAASEISPFVQMNLTSIRKSSVHFEQK
DLQLLIKKNETWIERDKTVSSLRLDTVIKEIYPLSRKEATVFIQKGLVKVNYKLVDDNKFQLQEKDMISIRGHGRSKLTS
IRGKSKKDKVKITIATLK

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 30042; Mature: 30042

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVYQHFRKEEQPFIDQVFSWKEQVERSFIPKLTDFLDPREQEIVTSLIGEHNEELQVRG
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE
FGGSNKSERSRMILAPKYEEITEDMFQIQLLEANFQPKFVMIEHPDVMGAFLSQGIKRKK
CCCCCCCCCCEEEECCCHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHHCCCCHHC
LGDIIIEDGKIQIIAASEISPFVQMNLTSIRKSSVHFEQKDLQLLIKKNETWIERDKTVS
CCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHH
SLRLDTVIKEIYPLSRKEATVFIQKGLVKVNYKLVDDNKFQLQEKDMISIRGHGRSKLTS
HHHHHHHHHHHCCCCCCHHEEEEECCEEEEEEEEECCCCEEECCCCEEEEECCCHHHHHH
IRGKSKKDKVKITIATLK
HCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MEVYQHFRKEEQPFIDQVFSWKEQVERSFIPKLTDFLDPREQEIVTSLIGEHNEELQVRG
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE
FGGSNKSERSRMILAPKYEEITEDMFQIQLLEANFQPKFVMIEHPDVMGAFLSQGIKRKK
CCCCCCCCCCEEEECCCHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHHCCCCHHC
LGDIIIEDGKIQIIAASEISPFVQMNLTSIRKSSVHFEQKDLQLLIKKNETWIERDKTVS
CCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHH
SLRLDTVIKEIYPLSRKEATVFIQKGLVKVNYKLVDDNKFQLQEKDMISIRGHGRSKLTS
HHHHHHHHHHHCCCCCCHHEEEEECCEEEEEEEEECCCCEEECCCCEEEEECCCHHHHHH
IRGKSKKDKVKITIATLK
HCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9384377 [H]