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The map label for this gene is ylbF [H]

Identifier: 23098903

GI number: 23098903

Start: 1487067

End: 1487504

Strand: Direct

Name: ylbF [H]

Synonym: OB1448

Alternate gene names: 23098903

Gene position: 1487067-1487504 (Clockwise)

Preceding gene: 23098902

Following gene: 23098904

Centisome position: 40.96

GC content: 40.41

Gene sequence:

>438_bases
ATGATAGCTACGATGGAGTATGTCAATATTTTGGATGAATCCGAGAAATTAGGAAAGATGATTTTACAATCGGATATCAT
GCAGGATTATCAAACTACTCGTTCCACCATGGAAACGGATGATGAGGCACAGAAGTTGATCAGAGAATTCTCTGCGATGA
AAGAGCATTACGATGATGTGCAGCGTTTTGGAAGATATCATCCCGATTACTATGACATCATGAAAAAAGTACGATCAACA
AAAAGGGAAATGGATATGAATGATAAAGTAGCTGCATTCAAAATTGCAGAAAGAAATCTGCAAAAACTTCTAGATGAAAT
AAGTAGTTTTGTTGCAAATAGTGTCAGCGAACAAGTGAAAGCTCCAAGAGAAGGTGCAGCACTGTCAGATAGTGGCTGTG
GCTGTGGGAGCGGTGGAGCTTGTGGCTGTGCCTCCTAG

Upstream 100 bases:

>100_bases
TCGGATGTTAGCTGAGATGGCAAAAGCGATGAAGGATTAAAAGTCATTCTATTTTCATTCCATTAATAAAATGGTAGTAT
TGAAAGTGGAGGTGTAATGA

Downstream 100 bases:

>100_bases
ACATATACGGATGGAAGAGAGCTTTTTTAGAAGAGCTCTCCTCTGTCCATACATATAACTATTCAAAGGGGACAGATGAA
TGAGAGTAAACAGACAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIATMEYVNILDESEKLGKMILQSDIMQDYQTTRSTMETDDEAQKLIREFSAMKEHYDDVQRFGRYHPDYYDIMKKVRST
KREMDMNDKVAAFKIAERNLQKLLDEISSFVANSVSEQVKAPREGAALSDSGCGCGSGGACGCAS

Sequences:

>Translated_145_residues
MIATMEYVNILDESEKLGKMILQSDIMQDYQTTRSTMETDDEAQKLIREFSAMKEHYDDVQRFGRYHPDYYDIMKKVRST
KREMDMNDKVAAFKIAERNLQKLLDEISSFVANSVSEQVKAPREGAALSDSGCGCGSGGACGCAS
>Mature_145_residues
MIATMEYVNILDESEKLGKMILQSDIMQDYQTTRSTMETDDEAQKLIREFSAMKEHYDDVQRFGRYHPDYYDIMKKVRST
KREMDMNDKVAAFKIAERNLQKLLDEISSFVANSVSEQVKAPREGAALSDSGCGCGSGGACGCAS

Specific function: Regulates sporulation prior to stage II. Positively controls the competence regulator ComK at a post-transcriptional level. May modulate the translation, stability or activity of ComS. May work together with YmcA to regulate community development [H]

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16316; Mature: 16316

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATMEYVNILDESEKLGKMILQSDIMQDYQTTRSTMETDDEAQKLIREFSAMKEHYDDV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QRFGRYHPDYYDIMKKVRSTKREMDMNDKVAAFKIAERNLQKLLDEISSFVANSVSEQVK
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APREGAALSDSGCGCGSGGACGCAS
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIATMEYVNILDESEKLGKMILQSDIMQDYQTTRSTMETDDEAQKLIREFSAMKEHYDDV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QRFGRYHPDYYDIMKKVRSTKREMDMNDKVAAFKIAERNLQKLLDEISSFVANSVSEQVK
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APREGAALSDSGCGCGSGGACGCAS
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10712692 [H]