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The map label for this gene is 23098889

Identifier: 23098889

GI number: 23098889

Start: 1474518

End: 1474823

Strand: Direct

Name: 23098889

Synonym: OB1434

Alternate gene names: NA

Gene position: 1474518-1474823 (Clockwise)

Preceding gene: 23098885

Following gene: 23098891

Centisome position: 40.61

GC content: 42.81

Gene sequence:

>306_bases
ATGGGTTGGTGCGGGTATTACGCTTTAGCGGAGACACCTTCAAAGTTTGAGGAGTTCGATAAGTGGATAAGAAGAAGATT
GCGCATGTGTATGTGGAAACAATGGAAGCTTCCACGGACAAAAGTCCGAAAGCTGATTAGCTTGGGTGTTCCTGACCACA
AAGCATACGAATGGGGAAACACCAGAAAGAATTATTGGCGTATCTCCAAGAGTCCAATCTTAAGCAGAACCCTAGGCAAC
TCCTATTGGAGTAGACTAGGGCTCAAAAGTCTGTATCAAAGGTATGAATTTATTCGTAATACTTAA

Upstream 100 bases:

>100_bases
CGGCCTTGGAAACGTAAGTTTACAGAAAATCAGGGAAATAACTTCACGTTCCAAGCCATTTCCTATGGAAGTAAGAATTG
AGAAATTAAACAAATACCTG

Downstream 100 bases:

>100_bases
TTGAACCGCCGTATACCGAACGGTACGTACGGTGGTGTGAGAGGACGGGGGTTAGTCGCCCCCTTCTACTCTATTGAAGG
TCGAGTAGTTACGAGGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Recombinase; Group II Intron-Encoding Maturase Variant; Reverse Transcriptase/Maturase; Reverse Transcriptase/Maturase Family Protein; Group II Intron Maturase-Specific Domain-Containing Protein; Integron/Retron-Type RNA-Directed DNA Polymerase; Reverse Transcriptase; Group II Intron-Encoded Protein; Group II Intron-Encoding Maturase; Transposase; Retron-Type Reverse Transcriptase; Ecombinase For Bh.Int; Group II Intron-Encoded Maturase; Group II Intron Maturase-Specific Domain Protein

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MGWCGYYALAETPSKFEEFDKWIRRRLRMCMWKQWKLPRTKVRKLISLGVPDHKAYEWGNTRKNYWRISKSPILSRTLGN
SYWSRLGLKSLYQRYEFIRNT

Sequences:

>Translated_101_residues
MGWCGYYALAETPSKFEEFDKWIRRRLRMCMWKQWKLPRTKVRKLISLGVPDHKAYEWGNTRKNYWRISKSPILSRTLGN
SYWSRLGLKSLYQRYEFIRNT
>Mature_100_residues
GWCGYYALAETPSKFEEFDKWIRRRLRMCMWKQWKLPRTKVRKLISLGVPDHKAYEWGNTRKNYWRISKSPILSRTLGNS
YWSRLGLKSLYQRYEFIRNT

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12429; Mature: 12297

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWCGYYALAETPSKFEEFDKWIRRRLRMCMWKQWKLPRTKVRKLISLGVPDHKAYEWGN
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
TRKNYWRISKSPILSRTLGNSYWSRLGLKSLYQRYEFIRNT
CCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GWCGYYALAETPSKFEEFDKWIRRRLRMCMWKQWKLPRTKVRKLISLGVPDHKAYEWGN
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
TRKNYWRISKSPILSRTLGNSYWSRLGLKSLYQRYEFIRNT
CCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA