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The map label for this gene is pepF2 [H]

Identifier: 23098825

GI number: 23098825

Start: 1417635

End: 1419413

Strand: Direct

Name: pepF2 [H]

Synonym: OB1370

Alternate gene names: 23098825

Gene position: 1417635-1419413 (Clockwise)

Preceding gene: 23098824

Following gene: 23098826

Centisome position: 39.05

GC content: 34.85

Gene sequence:

>1779_bases
ATGTCATTTACACTATCACCAGTCTGGGATTTAGATACCATATTCCCAGGAGGAAGCCATTCTAAGGAATACCAGAATCA
TGTTCAACAGGTAAGAGAAGATATAACTTTAGTATCACAACAAGTTACACAAATCGATACGTCTATTATTAGAGTAGATG
AATGGACTAATCTCTTTATAAAATTGGAGAAGTTGCAAAAAGAATTTCGTGAGGCAGCAGCTTTTGTTAGTTGTTTAAGT
GCTCAGGACGTAAAAGATGAACAAGCGAATCTACTTGTTGCAGAGCGAAGTGAGTTATCAGCTGAAATGGAAGGATTAAC
TACATTAATTGACCAAAAAGTAGCTCAAGTTCCAGAAAAAGAATGGGAAGAATTAATAGGCTCACCTGAATTAAAAGATT
TAGAATTTGTATTAAGGGAAAAAAGAGAAAAAGCAAAGAAACAATTAGCGAAAGAAGTAGAAATGTTAAAAAATGACCTT
TCTGTTGATGGGTATCATGCATGGAATCAAATGTATGGTACTATTGTTGGGAAGATGAGTGTTGAACTTGAGGAAGATGG
AGAGATTAAAGCGTACTCTGTTGGACAGGCTGCGAATAAAGCAAATCATCCAGATCGTAAAAACAGAAAGTATGTATTTG
ATCAAATATCTAAAGCGTGGGAGAAAGACGCAGATTTAATTAGCCAAACATTAAATCATCTGGCAGGATTTCGACTACAA
ACATACAAGCATTATGGATGGAACAATGTATTAAAAGAACCGTTAGAGAAGAATCGTATGAAACAAGAAACGCTTGATGC
GATGTGGAATGCAATAGAAAAAAATAAACATCATTTTGTAAAATATTTAGATAAGAAAGCTGAGTTACTAGAGTTGGATA
AATTAAGTGTTTATGACATTGGTGCTCCACTCGGTAAAGAAGAAGAAAAGAAAAGTTATTCAGAAGGTGCAGCATTTATT
GTTAATCATTTTGCGAAATTTAGTCCTAAAATGGCAGACTTTGCACAAATGGCTTTTGAAAAAAATTGGATAGAAGCAGA
AGATAGACCAGGGAAACGTCCTGGTGGATTTTGTACAAGCTTTCCGAATAGTGAGCAGACAAGAATTTTTATGACTTATT
CTGGAACATCTTCTAATATAGCAACATTGGCGCATGAACTCGGACACGCTTATCATCAACATGTCATGAATGATGTTAAT
GGATTAAATCAAAGATATGCGATGAATGTAGCCGAAACAGCTTCTACCTTTGCGGAAATGATTGTTGCTGATGCATCTGT
ACAATCTTCAACAACTAAGGAAGAGAAGCTATCTCAGCTTGAAGTAAAAATCAAGCGTAGTATTGCATTTTTTATGAATA
TTCATTCCCGCTTTTTGTTTGAAACACGTTTTTACGAAGAAAGAAAAAAAGGAATGGTGTCGGTAGACCGTTTAAATCAA
TTGATGGTGGAAGCGCAGAAAGAAGCGTATTGCGATAGATTGGATGAATATGATCCAAACTTCTGGGCTTCAAAAATGCA
TTTCCATATTACTGGAGTACCTTTTTATAACTTCCCGTATACATTTGGATACTTATTTAGTCTAGGAATTTACAAGCATG
CTCAAGAACAAGGAGGAAGTTTTGAAGAGGATTATATCGCATTATTAAGAGATACTGGAAGAATGACTGTAGAAGAACTA
GCACAAAAACATTTACAAGTAGATCTAACAAAACCTGATTTTTGGGAAGAGGCAATTTCCTTATGTGTTAAGGATGTTGA
GACATTTCTTCAATTATAA

Upstream 100 bases:

>100_bases
AGTGAAATACTTTTGTTCCAACCAATTTTTAATGTTTATTTTCAAAACTTTCGTTATAATTAAGAAGACAAAAGATTTTA
AATAATGAAGGAGGGATTTG

Downstream 100 bases:

>100_bases
ACTATTGTATAAATAGCCAGATTAACGTACAATAAAATATAGCAAAAAAGTAAATAGAAAAAAGCCTGCAAGGGGAGCCA
TATGGCTGAGAGTGGACGTA

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MSFTLSPVWDLDTIFPGGSHSKEYQNHVQQVREDITLVSQQVTQIDTSIIRVDEWTNLFIKLEKLQKEFREAAAFVSCLS
AQDVKDEQANLLVAERSELSAEMEGLTTLIDQKVAQVPEKEWEELIGSPELKDLEFVLREKREKAKKQLAKEVEMLKNDL
SVDGYHAWNQMYGTIVGKMSVELEEDGEIKAYSVGQAANKANHPDRKNRKYVFDQISKAWEKDADLISQTLNHLAGFRLQ
TYKHYGWNNVLKEPLEKNRMKQETLDAMWNAIEKNKHHFVKYLDKKAELLELDKLSVYDIGAPLGKEEEKKSYSEGAAFI
VNHFAKFSPKMADFAQMAFEKNWIEAEDRPGKRPGGFCTSFPNSEQTRIFMTYSGTSSNIATLAHELGHAYHQHVMNDVN
GLNQRYAMNVAETASTFAEMIVADASVQSSTTKEEKLSQLEVKIKRSIAFFMNIHSRFLFETRFYEERKKGMVSVDRLNQ
LMVEAQKEAYCDRLDEYDPNFWASKMHFHITGVPFYNFPYTFGYLFSLGIYKHAQEQGGSFEEDYIALLRDTGRMTVEEL
AQKHLQVDLTKPDFWEEAISLCVKDVETFLQL

Sequences:

>Translated_592_residues
MSFTLSPVWDLDTIFPGGSHSKEYQNHVQQVREDITLVSQQVTQIDTSIIRVDEWTNLFIKLEKLQKEFREAAAFVSCLS
AQDVKDEQANLLVAERSELSAEMEGLTTLIDQKVAQVPEKEWEELIGSPELKDLEFVLREKREKAKKQLAKEVEMLKNDL
SVDGYHAWNQMYGTIVGKMSVELEEDGEIKAYSVGQAANKANHPDRKNRKYVFDQISKAWEKDADLISQTLNHLAGFRLQ
TYKHYGWNNVLKEPLEKNRMKQETLDAMWNAIEKNKHHFVKYLDKKAELLELDKLSVYDIGAPLGKEEEKKSYSEGAAFI
VNHFAKFSPKMADFAQMAFEKNWIEAEDRPGKRPGGFCTSFPNSEQTRIFMTYSGTSSNIATLAHELGHAYHQHVMNDVN
GLNQRYAMNVAETASTFAEMIVADASVQSSTTKEEKLSQLEVKIKRSIAFFMNIHSRFLFETRFYEERKKGMVSVDRLNQ
LMVEAQKEAYCDRLDEYDPNFWASKMHFHITGVPFYNFPYTFGYLFSLGIYKHAQEQGGSFEEDYIALLRDTGRMTVEEL
AQKHLQVDLTKPDFWEEAISLCVKDVETFLQL
>Mature_591_residues
SFTLSPVWDLDTIFPGGSHSKEYQNHVQQVREDITLVSQQVTQIDTSIIRVDEWTNLFIKLEKLQKEFREAAAFVSCLSA
QDVKDEQANLLVAERSELSAEMEGLTTLIDQKVAQVPEKEWEELIGSPELKDLEFVLREKREKAKKQLAKEVEMLKNDLS
VDGYHAWNQMYGTIVGKMSVELEEDGEIKAYSVGQAANKANHPDRKNRKYVFDQISKAWEKDADLISQTLNHLAGFRLQT
YKHYGWNNVLKEPLEKNRMKQETLDAMWNAIEKNKHHFVKYLDKKAELLELDKLSVYDIGAPLGKEEEKKSYSEGAAFIV
NHFAKFSPKMADFAQMAFEKNWIEAEDRPGKRPGGFCTSFPNSEQTRIFMTYSGTSSNIATLAHELGHAYHQHVMNDVNG
LNQRYAMNVAETASTFAEMIVADASVQSSTTKEEKLSQLEVKIKRSIAFFMNIHSRFLFETRFYEERKKGMVSVDRLNQL
MVEAQKEAYCDRLDEYDPNFWASKMHFHITGVPFYNFPYTFGYLFSLGIYKHAQEQGGSFEEDYIALLRDTGRMTVEELA
QKHLQVDLTKPDFWEEAISLCVKDVETFLQL

Specific function: Hydrolyzes peptides containing between 7 and 17 amino acids with a rather wide specificity [H]

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68303; Mature: 68172

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTLSPVWDLDTIFPGGSHSKEYQNHVQQVREDITLVSQQVTQIDTSIIRVDEWTNLFI
CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH
KLEKLQKEFREAAAFVSCLSAQDVKDEQANLLVAERSELSAEMEGLTTLIDQKVAQVPEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHH
EWEELIGSPELKDLEFVLREKREKAKKQLAKEVEMLKNDLSVDGYHAWNQMYGTIVGKMS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE
VELEEDGEIKAYSVGQAANKANHPDRKNRKYVFDQISKAWEKDADLISQTLNHLAGFRLQ
EEECCCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TYKHYGWNNVLKEPLEKNRMKQETLDAMWNAIEKNKHHFVKYLDKKAELLELDKLSVYDI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
GAPLGKEEEKKSYSEGAAFIVNHFAKFSPKMADFAQMAFEKNWIEAEDRPGKRPGGFCTS
CCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
FPNSEQTRIFMTYSGTSSNIATLAHELGHAYHQHVMNDVNGLNQRYAMNVAETASTFAEM
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IVADASVQSSTTKEEKLSQLEVKIKRSIAFFMNIHSRFLFETRFYEERKKGMVSVDRLNQ
HHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH
LMVEAQKEAYCDRLDEYDPNFWASKMHFHITGVPFYNFPYTFGYLFSLGIYKHAQEQGGS
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
FEEDYIALLRDTGRMTVEELAQKHLQVDLTKPDFWEEAISLCVKDVETFLQL
CHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFTLSPVWDLDTIFPGGSHSKEYQNHVQQVREDITLVSQQVTQIDTSIIRVDEWTNLFI
CCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH
KLEKLQKEFREAAAFVSCLSAQDVKDEQANLLVAERSELSAEMEGLTTLIDQKVAQVPEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHH
EWEELIGSPELKDLEFVLREKREKAKKQLAKEVEMLKNDLSVDGYHAWNQMYGTIVGKMS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE
VELEEDGEIKAYSVGQAANKANHPDRKNRKYVFDQISKAWEKDADLISQTLNHLAGFRLQ
EEECCCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TYKHYGWNNVLKEPLEKNRMKQETLDAMWNAIEKNKHHFVKYLDKKAELLELDKLSVYDI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
GAPLGKEEEKKSYSEGAAFIVNHFAKFSPKMADFAQMAFEKNWIEAEDRPGKRPGGFCTS
CCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
FPNSEQTRIFMTYSGTSSNIATLAHELGHAYHQHVMNDVNGLNQRYAMNVAETASTFAEM
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IVADASVQSSTTKEEKLSQLEVKIKRSIAFFMNIHSRFLFETRFYEERKKGMVSVDRLNQ
HHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH
LMVEAQKEAYCDRLDEYDPNFWASKMHFHITGVPFYNFPYTFGYLFSLGIYKHAQEQGGS
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
FEEDYIALLRDTGRMTVEELAQKHLQVDLTKPDFWEEAISLCVKDVETFLQL
CHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9209029 [H]