Click here to switch to the map view.

The map label for this gene is 23097868

Identifier: 23097868

GI number: 23097868

Start: 441682

End: 442203

Strand: Direct

Name: 23097868

Synonym: OB0413

Alternate gene names: NA

Gene position: 441682-442203 (Clockwise)

Preceding gene: 23097867

Following gene: 23097869

Centisome position: 12.17

GC content: 36.4

Gene sequence:

>522_bases
ATGGACGTGAGATTCCCAATTGGCAAATTACAAGTACCTGAGAAAGTTACAATCGAAGATATTCATGAATGGCTAAAGCA
AATTGAAACGTACACGAATCGATTAGGAGAAACAGTTAACTCATTAAATGATGAGGAATTAAGTAAAACTTATCGTGAAG
GTAGCTGGGACATTCGCCAACTTGTTCATCATATTGCTGATTCTCAGTTGAATATGTATCAGCGCTTGAAGTTGGCTTTA
ACGGATGAAAGTCCAACAGTACCTGCTTTTGATCAAGAAAAGTGGGCTATTCAACCGGATACAAACCTGCCTGTAGAAAC
TTCTATAAAAATGTTGGAAGGTATAAATGAACGAATCGTGTCTTTAGGGTATAGGTTAACCGAGGAGCAATTAGATCAAT
CTTTTGTTCATCAAATAAATGGAGAAATATCAGTTGCCTCAAAAGTTGCAAAATTAGCTTGGCATGAAGAACATCATTTA
GCGCATATAAAAATAGCATTATCGAACAATAGCGGATCGTAA

Upstream 100 bases:

>100_bases
GAGATTTAACGTATCGTATTCCGCTTTGAATATTAATTTATGAATATGGTATACAAGAACGATGCTAATGAAATAAATAA
TCAAGGAAAGAGGGTTGAAC

Downstream 100 bases:

>100_bases
AAAAAGAATAAATAATTCTTAGATAAAAATGAAGAGGCTGAGACATAACAAAAAGTGCTAGTCAAAAGACGAATGAAAGC
TAGAATAAGCGCAGTATATT

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDVRFPIGKLQVPEKVTIEDIHEWLKQIETYTNRLGETVNSLNDEELSKTYREGSWDIRQLVHHIADSQLNMYQRLKLAL
TDESPTVPAFDQEKWAIQPDTNLPVETSIKMLEGINERIVSLGYRLTEEQLDQSFVHQINGEISVASKVAKLAWHEEHHL
AHIKIALSNNSGS

Sequences:

>Translated_173_residues
MDVRFPIGKLQVPEKVTIEDIHEWLKQIETYTNRLGETVNSLNDEELSKTYREGSWDIRQLVHHIADSQLNMYQRLKLAL
TDESPTVPAFDQEKWAIQPDTNLPVETSIKMLEGINERIVSLGYRLTEEQLDQSFVHQINGEISVASKVAKLAWHEEHHL
AHIKIALSNNSGS
>Mature_173_residues
MDVRFPIGKLQVPEKVTIEDIHEWLKQIETYTNRLGETVNSLNDEELSKTYREGSWDIRQLVHHIADSQLNMYQRLKLAL
TDESPTVPAFDQEKWAIQPDTNLPVETSIKMLEGINERIVSLGYRLTEEQLDQSFVHQINGEISVASKVAKLAWHEEHHL
AHIKIALSNNSGS

Specific function: Possible metal-dependent hydrolase

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metal hydrolase yfiT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y413_OCEIH (Q8ET50)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_691334.1
- ProteinModelPortal:   Q8ET50
- SMR:   Q8ET50
- GeneID:   1015697
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0413
- NMPDR:   fig|221109.1.peg.419
- HOGENOM:   HBG293279
- OMA:   HHIADSQ
- ProtClustDB:   PRK13291
- BioCyc:   OIHE221109:OB0413-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01256
- InterPro:   IPR007837

Pfam domain/function: PF05163 DinB

EC number: NA

Molecular weight: Translated: 19868; Mature: 19868

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRFPIGKLQVPEKVTIEDIHEWLKQIETYTNRLGETVNSLNDEELSKTYREGSWDIRQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
LVHHIADSQLNMYQRLKLALTDESPTVPAFDQEKWAIQPDTNLPVETSIKMLEGINERIV
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
SLGYRLTEEQLDQSFVHQINGEISVASKVAKLAWHEEHHLAHIKIALSNNSGS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MDVRFPIGKLQVPEKVTIEDIHEWLKQIETYTNRLGETVNSLNDEELSKTYREGSWDIRQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
LVHHIADSQLNMYQRLKLALTDESPTVPAFDQEKWAIQPDTNLPVETSIKMLEGINERIV
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
SLGYRLTEEQLDQSFVHQINGEISVASKVAKLAWHEEHHLAHIKIALSNNSGS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376