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The map label for this gene is glgA

Identifier: 23097864

GI number: 23097864

Start: 436675

End: 438108

Strand: Direct

Name: glgA

Synonym: OB0409

Alternate gene names: 23097864

Gene position: 436675-438108 (Clockwise)

Preceding gene: 23097863

Following gene: 23097865

Centisome position: 12.03

GC content: 34.94

Gene sequence:

>1434_bases
ATGAAAAACATTTTATTTGTCACCTCAGAATGTACACCATTTATTAAGACAGGCGGACTTGCGGATGTATCTGGATCGTT
GCCACAAGCTCTTCAGGAACATGGAGGAATGGAAGTAAGAGTGATGTTACCTTTATATGATGAAATTGATCGTTCTTGGA
AGGATCAATTTGAATTTGTGTGCGCTTTTACGGTCTCATTAGGGTGGAGAGAACAAACTGCAGAGCTATATCGTTATCGT
TATAATGACGTCACGTATTATTTCATCGGAAACGATTATTATTTTACTAGAAAAGGAATATACGGCTATTACGATGATGG
AGAACGATTTGTATTTTTTAGTCAGGCTATTATAGCTTCTTTAGAATATATCGATTTTATACCAAGTGTATTACATGCCC
ATGATTGGCAAACAGGGATAGCTGTTGCACTAGCTAAAATCTATCAACCTATTGAAGAATTGATTACCGTTTTTACCATT
CATAATATATATTACCAAGGGACAATGCCTTTAACGACATTTGATGATTTTTTTCAATTAGGCAGAGAACATTTAGCAGG
CATGGAATGGAATCAAATGATTAATAGTTTGAAATCAGGCATTTTTCATGCCGATAAAATAACGACAGTAAGTCCAACCT
ATGCAGAAGAAATACTAACACCTTATTACGGTGCCGGACTGGAAGAGATGCTTTGGAATCGGCGAGAAGACTTGATAGGA
GTGCTAAATGGGATTGATTTAAAAGATTATAATCCTGCTATAGATAAATCTTTACCAGTTAACTACCGTTCTGCACGGTC
GAAAAAAATAGAGAATCGTAAGTTACTCTATGAAGAAATAGGTTTGAATCTTAAAGATGGAGTACCTCTTTATATTATGG
TTACTAGACTAGTAGAACAGAAAGGAATTCATCTTGTTCAACGAATTTTAGAGGAATTTTTACAAGAGGATATTCAATTG
ATTGTTCTTGGAAATGGAGAACAGGAATTTGAATACTATTTCAAAGACATCGAATACCGTTACCCAGATAAAATGATTAC
CCACCTGCATTTTAATGAATCATTAGCTAGGAGATTATATGCAAGTGCCGATTTTCTCCTGATGCCATCGAAGTTTGAGC
CATGTGGGTTATCTCAATTAATTGCTTTACAATATAAAACCGTACCTATTGTCCGTGAGACAGGAGGATTAAAAGATACG
ATAATTGCTTTTAATGAAATTACAGGAGAAGGAAATGGCTTTCGATTTGCCAATTATAATGCACATGAACTTTTACATGT
ACTGAAGTACTCTCTGGAGATTTATCAACAACCTTCACTTTGGTCAGTATTAATAAAGAATGTAAATAAAAGTAAATTTA
GTTGGAAGGATTCCGCGTCTGCATATGCAGACGTATATCAACAGCTCGATGCTTCATCTGTATCTTATAAATAG

Upstream 100 bases:

>100_bases
TCGTAGTAACAACAGGGCAGCGAATTATAGGATCAAAGGAAAAACCATACGTCGTAGCCAAAAGACAAGTAATATAAAGT
GAACCTAGGAAGGTGAGAAG

Downstream 100 bases:

>100_bases
GGAGCGGGTCTGATTTGAAGTTGAGAAAGAAAAAATTAGTGAATCGAATTTCACAAGAATTAGCGCATCAAAAAGGATTA
ACGATAGAAGGTGCTAGTTC

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKNILFVTSECTPFIKTGGLADVSGSLPQALQEHGGMEVRVMLPLYDEIDRSWKDQFEFVCAFTVSLGWREQTAELYRYR
YNDVTYYFIGNDYYFTRKGIYGYYDDGERFVFFSQAIIASLEYIDFIPSVLHAHDWQTGIAVALAKIYQPIEELITVFTI
HNIYYQGTMPLTTFDDFFQLGREHLAGMEWNQMINSLKSGIFHADKITTVSPTYAEEILTPYYGAGLEEMLWNRREDLIG
VLNGIDLKDYNPAIDKSLPVNYRSARSKKIENRKLLYEEIGLNLKDGVPLYIMVTRLVEQKGIHLVQRILEEFLQEDIQL
IVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLYASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDT
IIAFNEITGEGNGFRFANYNAHELLHVLKYSLEIYQQPSLWSVLIKNVNKSKFSWKDSASAYADVYQQLDASSVSYK

Sequences:

>Translated_477_residues
MKNILFVTSECTPFIKTGGLADVSGSLPQALQEHGGMEVRVMLPLYDEIDRSWKDQFEFVCAFTVSLGWREQTAELYRYR
YNDVTYYFIGNDYYFTRKGIYGYYDDGERFVFFSQAIIASLEYIDFIPSVLHAHDWQTGIAVALAKIYQPIEELITVFTI
HNIYYQGTMPLTTFDDFFQLGREHLAGMEWNQMINSLKSGIFHADKITTVSPTYAEEILTPYYGAGLEEMLWNRREDLIG
VLNGIDLKDYNPAIDKSLPVNYRSARSKKIENRKLLYEEIGLNLKDGVPLYIMVTRLVEQKGIHLVQRILEEFLQEDIQL
IVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLYASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDT
IIAFNEITGEGNGFRFANYNAHELLHVLKYSLEIYQQPSLWSVLIKNVNKSKFSWKDSASAYADVYQQLDASSVSYK
>Mature_477_residues
MKNILFVTSECTPFIKTGGLADVSGSLPQALQEHGGMEVRVMLPLYDEIDRSWKDQFEFVCAFTVSLGWREQTAELYRYR
YNDVTYYFIGNDYYFTRKGIYGYYDDGERFVFFSQAIIASLEYIDFIPSVLHAHDWQTGIAVALAKIYQPIEELITVFTI
HNIYYQGTMPLTTFDDFFQLGREHLAGMEWNQMINSLKSGIFHADKITTVSPTYAEEILTPYYGAGLEEMLWNRREDLIG
VLNGIDLKDYNPAIDKSLPVNYRSARSKKIENRKLLYEEIGLNLKDGVPLYIMVTRLVEQKGIHLVQRILEEFLQEDIQL
IVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLYASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDT
IIAFNEITGEGNGFRFANYNAHELLHVLKYSLEIYQQPSLWSVLIKNVNKSKFSWKDSASAYADVYQQLDASSVSYK

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=495, Percent_Identity=35.7575757575758, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_OCEIH (Q8ET54)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_691330.1
- ProteinModelPortal:   Q8ET54
- SMR:   Q8ET54
- GeneID:   1015695
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0409
- NMPDR:   fig|221109.1.peg.415
- HOGENOM:   HBG596384
- OMA:   WRRQYVG
- ProtClustDB:   CLSK2462060
- BioCyc:   OIHE221109:OB0409-MONOMER
- BRENDA:   2.4.1.21
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 55252; Mature: 55252

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: BINDING 16-16

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILFVTSECTPFIKTGGLADVSGSLPQALQEHGGMEVRVMLPLYDEIDRSWKDQFEFV
CCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHEE
CAFTVSLGWREQTAELYRYRYNDVTYYFIGNDYYFTRKGIYGYYDDGERFVFFSQAIIAS
EEEEEECCCHHHHHHHHHEEECCEEEEEECCEEEEEECCEEEEEECCCEEEEEHHHHHHH
LEYIDFIPSVLHAHDWQTGIAVALAKIYQPIEELITVFTIHNIYYQGTMPLTTFDDFFQL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
GREHLAGMEWNQMINSLKSGIFHADKITTVSPTYAEEILTPYYGAGLEEMLWNRREDLIG
HHHHHCCCCHHHHHHHHHHCCEECCCEEECCCHHHHHHCCCCCCCCHHHHHHCCHHHHHH
VLNGIDLKDYNPAIDKSLPVNYRSARSKKIENRKLLYEEIGLNLKDGVPLYIMVTRLVEQ
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KGIHLVQRILEEFLQEDIQLIVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLY
CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHEECCHHHHHHHH
ASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDTIIAFNEITGEGNGFRFANYN
CCCCEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHEEEEEEECCCCCCEEEECCC
AHELLHVLKYSLEIYQQPSLWSVLIKNVNKSKFSWKDSASAYADVYQQLDASSVSYK
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKNILFVTSECTPFIKTGGLADVSGSLPQALQEHGGMEVRVMLPLYDEIDRSWKDQFEFV
CCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHEE
CAFTVSLGWREQTAELYRYRYNDVTYYFIGNDYYFTRKGIYGYYDDGERFVFFSQAIIAS
EEEEEECCCHHHHHHHHHEEECCEEEEEECCEEEEEECCEEEEEECCCEEEEEHHHHHHH
LEYIDFIPSVLHAHDWQTGIAVALAKIYQPIEELITVFTIHNIYYQGTMPLTTFDDFFQL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
GREHLAGMEWNQMINSLKSGIFHADKITTVSPTYAEEILTPYYGAGLEEMLWNRREDLIG
HHHHHCCCCHHHHHHHHHHCCEECCCEEECCCHHHHHHCCCCCCCCHHHHHHCCHHHHHH
VLNGIDLKDYNPAIDKSLPVNYRSARSKKIENRKLLYEEIGLNLKDGVPLYIMVTRLVEQ
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KGIHLVQRILEEFLQEDIQLIVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLY
CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHEECCHHHHHHHH
ASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDTIIAFNEITGEGNGFRFANYN
CCCCEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHEEEEEEECCCCCCEEEECCC
AHELLHVLKYSLEIYQQPSLWSVLIKNVNKSKFSWKDSASAYADVYQQLDASSVSYK
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376