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The map label for this gene is nudF [H]

Identifier: 23097840

GI number: 23097840

Start: 408511

End: 409326

Strand: Direct

Name: nudF [H]

Synonym: OB0385

Alternate gene names: 23097840

Gene position: 408511-409326 (Clockwise)

Preceding gene: 23097839

Following gene: 23097841

Centisome position: 11.25

GC content: 36.27

Gene sequence:

>816_bases
ATGCCCAAATTCGATCAAAAACAAGCATTTTTACAACCGAATTCTTCAAAAAAATATATAACTCCAGATGGGTATACAAG
TGATATTGCTGTCTTTACTATCGTATCGAATACGATTGTTGAGAATACAAGTAAACGAAAAGTACTACCAAAAAAATTAT
TAAAACTACTTTTAATTCGAAGGGTTGAAATAGACAAGCATGGAAATCCAAATGTTGAGGGTGGAAAGTGGGCGTTGCCT
GGAGGCTTTGTGGACGCAAAACAGCAAGAGACAGCCCATGAATCAGCGATGAGAGAATTAGTAGAAGAAACGGGTGTTGA
TCAAGTATATCTAAAACATTTTGGAGTTTATGATGACTGGGGACGTGATCCAAGAGGGTGGATTATATCCAATGCGCACT
ACGCCATCGTTCCTGAAGGTAAATTAACTAATCGCAAAGCAGCAGACGATGCGGCTGAAGTGAGATTGGTTTCTATAGAA
GAAGCGTTTGAATTACCATTAGCGTTTGATCATCGTCAAATTATTGATGACGCCTTAAAGCGAATTGAAAGAGATATGTT
GAATACAGATATAGCGAAGAATTTTTTGTTACATGAATTTACATTATCAGAACTCCAAGGAGTATTACTTACGGTATCTA
ATCATCCGAAAATAGCAAATAAATCTGTTTTTTTCACAAAAGCACCGAAGCTTCCTTTTTTAGAAAAAGTTGTTGATGAA
ACTGGAAATTGGAAGAAAACAGAGCGGAATTCTTATCGACCATCGCAATTATATCGGTTTACGAATCAAGTAATTGTACC
ATCTATCTGGGAATAA

Upstream 100 bases:

>100_bases
ATTACTAGATGTCAAATATGAATTGACATCTTCTTTTTTTGGCGTATAATAATTAGTAATTATAAAATTACAAATTACTT
CAAAAAATTGAGGTGAAGTT

Downstream 100 bases:

>100_bases
ATTGATTTTGCGCTTATGAATCCATAGAAAGTAGCGCATTCTATAATTTAGGAGGAAAACAATGAATTACATTGATGACA
GCTTGGCATTACATACGGAT

Product: MutT/nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MPKFDQKQAFLQPNSSKKYITPDGYTSDIAVFTIVSNTIVENTSKRKVLPKKLLKLLLIRRVEIDKHGNPNVEGGKWALP
GGFVDAKQQETAHESAMRELVEETGVDQVYLKHFGVYDDWGRDPRGWIISNAHYAIVPEGKLTNRKAADDAAEVRLVSIE
EAFELPLAFDHRQIIDDALKRIERDMLNTDIAKNFLLHEFTLSELQGVLLTVSNHPKIANKSVFFTKAPKLPFLEKVVDE
TGNWKKTERNSYRPSQLYRFTNQVIVPSIWE

Sequences:

>Translated_271_residues
MPKFDQKQAFLQPNSSKKYITPDGYTSDIAVFTIVSNTIVENTSKRKVLPKKLLKLLLIRRVEIDKHGNPNVEGGKWALP
GGFVDAKQQETAHESAMRELVEETGVDQVYLKHFGVYDDWGRDPRGWIISNAHYAIVPEGKLTNRKAADDAAEVRLVSIE
EAFELPLAFDHRQIIDDALKRIERDMLNTDIAKNFLLHEFTLSELQGVLLTVSNHPKIANKSVFFTKAPKLPFLEKVVDE
TGNWKKTERNSYRPSQLYRFTNQVIVPSIWE
>Mature_270_residues
PKFDQKQAFLQPNSSKKYITPDGYTSDIAVFTIVSNTIVENTSKRKVLPKKLLKLLLIRRVEIDKHGNPNVEGGKWALPG
GFVDAKQQETAHESAMRELVEETGVDQVYLKHFGVYDDWGRDPRGWIISNAHYAIVPEGKLTNRKAADDAAEVRLVSIEE
AFELPLAFDHRQIIDDALKRIERDMLNTDIAKNFLLHEFTLSELQGVLLTVSNHPKIANKSVFFTKAPKLPFLEKVVDET
GNWKKTERNSYRPSQLYRFTNQVIVPSIWE

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 30990; Mature: 30859

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFDQKQAFLQPNSSKKYITPDGYTSDIAVFTIVSNTIVENTSKRKVLPKKLLKLLLIR
CCCCCCCHHHCCCCCCCCEECCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHH
RVEIDKHGNPNVEGGKWALPGGFVDAKQQETAHESAMRELVEETGVDQVYLKHFGVYDDW
HHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
GRDPRGWIISNAHYAIVPEGKLTNRKAADDAAEVRLVSIEEAFELPLAFDHRQIIDDALK
CCCCCCEEEECCEEEEECCCCCCCCCCCCCHHHEEEEEHHHHHCCCCCCCHHHHHHHHHH
RIERDMLNTDIAKNFLLHEFTLSELQGVLLTVSNHPKIANKSVFFTKAPKLPFLEKVVDE
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHC
TGNWKKTERNSYRPSQLYRFTNQVIVPSIWE
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PKFDQKQAFLQPNSSKKYITPDGYTSDIAVFTIVSNTIVENTSKRKVLPKKLLKLLLIR
CCCCCCHHHCCCCCCCCEECCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHH
RVEIDKHGNPNVEGGKWALPGGFVDAKQQETAHESAMRELVEETGVDQVYLKHFGVYDDW
HHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
GRDPRGWIISNAHYAIVPEGKLTNRKAADDAAEVRLVSIEEAFELPLAFDHRQIIDDALK
CCCCCCEEEECCEEEEECCCCCCCCCCCCCHHHEEEEEHHHHHCCCCCCCHHHHHHHHHH
RIERDMLNTDIAKNFLLHEFTLSELQGVLLTVSNHPKIANKSVFFTKAPKLPFLEKVVDE
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHC
TGNWKKTERNSYRPSQLYRFTNQVIVPSIWE
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]