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The map label for this gene is yaaJ [C]

Identifier: 23097832

GI number: 23097832

Start: 401315

End: 402712

Strand: Direct

Name: yaaJ [C]

Synonym: OB0377

Alternate gene names: 23097832

Gene position: 401315-402712 (Clockwise)

Preceding gene: 23097831

Following gene: 23097833

Centisome position: 11.05

GC content: 37.98

Gene sequence:

>1398_bases
ATGATTAACATACTAGAAAATATCAATGACGTTCTTTGGGGAACCCCCAGTTTAATCTTACTGGTTGGAACTGGACTATT
TTTAACACTTATTTTAAAGGGCTTACAATTCAAAAGACTTGGCTATGCGTTTAAAGTTGCCTTCACAAAAGACAAAGAAG
ATGATGGAACGGAAGGTGACGTCAGCAACTTTAAGGCTTTAATGACATCGCTTGCAGGGATGGTCGGTAATGGAAACATT
GCCGGTGTAGCAACAGCGGTGACGCTTGGTGGACCAGGGGCAATCTTCTGGATGTGGATTGTTGGACTAGTAGGAATGGC
GACGAAATATGCAGAGGCTTTACTTGCGATGAAATATCGCGTGAAAAATGAGGACGGGGAGTATTCCAGTGGTCCAATGT
ATTATATCGAAAGAGGTATCGGCAAGAAGTGGAAACCGCTTGCTGTTGCTTTTGCCTTTTTTGGTGCTTTCGCAGCATTG
GGAATAGGAAATAGTGTACAGTCCAATACAATTGCCGATGTGATGGAAAATAGTTTTAGTATAAATGGTTTAACTACCGG
TATTATTCTTGTTATATTCACATCCTTGATTATATTTGGTGGATTACAACGTATTAGCTCAGTGGCGAGTGTATTTGTTC
CGATCATGGCACTTCTTTATATTGGTGCATCATTACTAATTATTGGTTTAAATTACGATAAAATTATTCCGGCTTTTGAA
TTAATATTTACCTATGCATTTAATCCGGTATCAGCTGTTGGTGGATTTTCCGGAGTTGTTGTTTCAGAAGCGATTCGAAA
TGGCGTATCGAAAGGAATCTTTTCAAATGAAGCAGGTCTTGGTACAGTTGCTTTAATTGCTGGAAATGCAAAAACAAGCC
ATCCAGTTAAACAGGCATTAGTGGCTATGACCGGTACATTTATAGTTACGATTATTGTTTGTACAATGACAGGAATGGTT
TTATTAGTTACTGGTTTTTGGGATACAACAGGTGGGCTTCTTTCTGGAGTCTCACATGATGCTAGTCTTGAAGCCGGAGC
GCTAACAAGTGCAGCTTTTGGATCAACGCTAGGTAATATTGGAGAATATGTTGTATCTATTTCTGTTGTATTCTTTGGTT
TCTCGACCATTTTAGGGTGGTATGTTTACGGTATAAAATGTTTTGAATATTTATTTGGCTTAAAATATGTAAGCATATAT
CGAACGATTTATATAGGCGCCACATTTATTGGGACCATTGCACAATTAACAACTGTTTGGGCATTTGCAGATATGGCTAA
CGCGTTAATGATGATTCCAAACCTTATTGGGTTGTTACTCTTATACAAAGTGGTTGCAAGTGAGACAAACGATTATTTCA
GTAACTTTTATAAACAATCTACCAAAAATATTGGTTAA

Upstream 100 bases:

>100_bases
AGGAATATGAGAAAGGTTTTACCCCCCTATTCTATCTAACAGGTAATGTAGTATATCTGTAATACATCACGAGCGTAACA
TAGTACATAGGAGGATATAA

Downstream 100 bases:

>100_bases
ATAGATTTTTTGAGTTAAATCCGCATATTACGATATGCGGATTTAATTTTGATATCTATACTATTAAATTAAATAGAGAA
GTAGTTATTATGGGATATCA

Product: amino acid transporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MINILENINDVLWGTPSLILLVGTGLFLTLILKGLQFKRLGYAFKVAFTKDKEDDGTEGDVSNFKALMTSLAGMVGNGNI
AGVATAVTLGGPGAIFWMWIVGLVGMATKYAEALLAMKYRVKNEDGEYSSGPMYYIERGIGKKWKPLAVAFAFFGAFAAL
GIGNSVQSNTIADVMENSFSINGLTTGIILVIFTSLIIFGGLQRISSVASVFVPIMALLYIGASLLIIGLNYDKIIPAFE
LIFTYAFNPVSAVGGFSGVVVSEAIRNGVSKGIFSNEAGLGTVALIAGNAKTSHPVKQALVAMTGTFIVTIIVCTMTGMV
LLVTGFWDTTGGLLSGVSHDASLEAGALTSAAFGSTLGNIGEYVVSISVVFFGFSTILGWYVYGIKCFEYLFGLKYVSIY
RTIYIGATFIGTIAQLTTVWAFADMANALMMIPNLIGLLLLYKVVASETNDYFSNFYKQSTKNIG

Sequences:

>Translated_465_residues
MINILENINDVLWGTPSLILLVGTGLFLTLILKGLQFKRLGYAFKVAFTKDKEDDGTEGDVSNFKALMTSLAGMVGNGNI
AGVATAVTLGGPGAIFWMWIVGLVGMATKYAEALLAMKYRVKNEDGEYSSGPMYYIERGIGKKWKPLAVAFAFFGAFAAL
GIGNSVQSNTIADVMENSFSINGLTTGIILVIFTSLIIFGGLQRISSVASVFVPIMALLYIGASLLIIGLNYDKIIPAFE
LIFTYAFNPVSAVGGFSGVVVSEAIRNGVSKGIFSNEAGLGTVALIAGNAKTSHPVKQALVAMTGTFIVTIIVCTMTGMV
LLVTGFWDTTGGLLSGVSHDASLEAGALTSAAFGSTLGNIGEYVVSISVVFFGFSTILGWYVYGIKCFEYLFGLKYVSIY
RTIYIGATFIGTIAQLTTVWAFADMANALMMIPNLIGLLLLYKVVASETNDYFSNFYKQSTKNIG
>Mature_465_residues
MINILENINDVLWGTPSLILLVGTGLFLTLILKGLQFKRLGYAFKVAFTKDKEDDGTEGDVSNFKALMTSLAGMVGNGNI
AGVATAVTLGGPGAIFWMWIVGLVGMATKYAEALLAMKYRVKNEDGEYSSGPMYYIERGIGKKWKPLAVAFAFFGAFAAL
GIGNSVQSNTIADVMENSFSINGLTTGIILVIFTSLIIFGGLQRISSVASVFVPIMALLYIGASLLIIGLNYDKIIPAFE
LIFTYAFNPVSAVGGFSGVVVSEAIRNGVSKGIFSNEAGLGTVALIAGNAKTSHPVKQALVAMTGTFIVTIIVCTMTGMV
LLVTGFWDTTGGLLSGVSHDASLEAGALTSAAFGSTLGNIGEYVVSISVVFFGFSTILGWYVYGIKCFEYLFGLKYVSIY
RTIYIGATFIGTIAQLTTVWAFADMANALMMIPNLIGLLLLYKVVASETNDYFSNFYKQSTKNIG

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=459, Percent_Identity=35.7298474945534, Blast_Score=247, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 49512; Mature: 49512

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINILENINDVLWGTPSLILLVGTGLFLTLILKGLQFKRLGYAFKVAFTKDKEDDGTEGD
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEEECCCCCCCCCCC
VSNFKALMTSLAGMVGNGNIAGVATAVTLGGPGAIFWMWIVGLVGMATKYAEALLAMKYR
HHHHHHHHHHHHHHCCCCCEEHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKNEDGEYSSGPMYYIERGIGKKWKPLAVAFAFFGAFAALGIGNSVQSNTIADVMENSFS
HCCCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
INGLTTGIILVIFTSLIIFGGLQRISSVASVFVPIMALLYIGASLLIIGLNYDKIIPAFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHH
LIFTYAFNPVSAVGGFSGVVVSEAIRNGVSKGIFSNEAGLGTVALIAGNAKTSHPVKQAL
HHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHH
VAMTGTFIVTIIVCTMTGMVLLVTGFWDTTGGLLSGVSHDASLEAGALTSAAFGSTLGNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
GEYVVSISVVFFGFSTILGWYVYGIKCFEYLFGLKYVSIYRTIYIGATFIGTIAQLTTVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFADMANALMMIPNLIGLLLLYKVVASETNDYFSNFYKQSTKNIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINILENINDVLWGTPSLILLVGTGLFLTLILKGLQFKRLGYAFKVAFTKDKEDDGTEGD
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEEECCCCCCCCCCC
VSNFKALMTSLAGMVGNGNIAGVATAVTLGGPGAIFWMWIVGLVGMATKYAEALLAMKYR
HHHHHHHHHHHHHHCCCCCEEHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKNEDGEYSSGPMYYIERGIGKKWKPLAVAFAFFGAFAALGIGNSVQSNTIADVMENSFS
HCCCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
INGLTTGIILVIFTSLIIFGGLQRISSVASVFVPIMALLYIGASLLIIGLNYDKIIPAFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHH
LIFTYAFNPVSAVGGFSGVVVSEAIRNGVSKGIFSNEAGLGTVALIAGNAKTSHPVKQAL
HHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHH
VAMTGTFIVTIIVCTMTGMVLLVTGFWDTTGGLLSGVSHDASLEAGALTSAAFGSTLGNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
GEYVVSISVVFFGFSTILGWYVYGIKCFEYLFGLKYVSIYRTIYIGATFIGTIAQLTTVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFADMANALMMIPNLIGLLLLYKVVASETNDYFSNFYKQSTKNIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]