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The map label for this gene is yrkC [H]

Identifier: 23097828

GI number: 23097828

Start: 398220

End: 399122

Strand: Direct

Name: yrkC [H]

Synonym: OB0373

Alternate gene names: 23097828

Gene position: 398220-399122 (Clockwise)

Preceding gene: 23097827

Following gene: 23097829

Centisome position: 10.97

GC content: 36.77

Gene sequence:

>903_bases
ATGTATTATATTCCTTATTATCCAAATGATCTTCGTTATGCTTCGCAGTCACCCTCTATAACGGAACAGGAGAAAGAAGA
GTTAGCAAAAATAACATTAGAGAACTTACAAAAAGATGCTGTGACCATCCAGTTATTAGATCAATTAAGCTCATCTATAA
ATGAACAACCATTTTTGAATACAATAAATTATACACGTGAGATTAAATTGAGAAACATAAATCAATTGGATTATTTATAT
AGAAATATCACCGGTAAGGCTCCGCGTTATGAGACAGAAGCAGAAGAAAGAAGCAATTCAGAATTAGGTATACAAGATAT
TGTGGAACGATGTATAGAAGATTATGAGGAAAACTATAAAGCTAGTCTAAAAAGTAACAGCTCAGCTGTTCAACAATTAC
ATTATCAATTATCATCAGTAGGTTATATGGCTGCAAATCAATTGTATAATTGTTATCATTATTCCAGAAATAATGAATCG
ACCACTGCTATGAAAAGACAGATTGGGGACTATGGTGGCCATCCATTCGTTATTGATATAGAGGATGCTGCTGAGCAAAA
TACAGCATATCGAACAGCAATTTGGACTGGAGAACATCTACAAGTCACATTGATGAGTATTCCTGTTGGTGATGATATTG
GTTTAGAAGTCCATAACGACCGCGATCAGTTTTTTCGAATAGAGGAAGGTGATGGTTTGGTTCAAATGGGAAGCCGAGAG
AATAATTTAACATATCGGCGACAACTGTCTGATGGGAGTGCTGTCATGGTACCGGCAGGAACGTGGCATAATATAACCAA
TACGGGAGATGAACCACTGAAATTATACTCTATTTACGCGCCCCCAGAACATCCATTTGGAACTGTGCATCAGACAAAAG
CGGATGCACTCGCTTCAGAATAA

Upstream 100 bases:

>100_bases
TTTAATTGTCTTTCTATTAATCAGTTAATCCAATAAGAACTATTTTTTACTGTGGGCATATGCTGATTTTAGATTCTAAG
AAAGGCAGGTTAATGAGTAC

Downstream 100 bases:

>100_bases
ATAAGAATATGCTATAACGCATGAAATTGGAGGAAACTCTGAGTTTATGCGTTTTTTCATTGAAAAGAGAGAATCTAAAA
CTATTTTGTGAATTATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MYYIPYYPNDLRYASQSPSITEQEKEELAKITLENLQKDAVTIQLLDQLSSSINEQPFLNTINYTREIKLRNINQLDYLY
RNITGKAPRYETEAEERSNSELGIQDIVERCIEDYEENYKASLKSNSSAVQQLHYQLSSVGYMAANQLYNCYHYSRNNES
TTAMKRQIGDYGGHPFVIDIEDAAEQNTAYRTAIWTGEHLQVTLMSIPVGDDIGLEVHNDRDQFFRIEEGDGLVQMGSRE
NNLTYRRQLSDGSAVMVPAGTWHNITNTGDEPLKLYSIYAPPEHPFGTVHQTKADALASE

Sequences:

>Translated_300_residues
MYYIPYYPNDLRYASQSPSITEQEKEELAKITLENLQKDAVTIQLLDQLSSSINEQPFLNTINYTREIKLRNINQLDYLY
RNITGKAPRYETEAEERSNSELGIQDIVERCIEDYEENYKASLKSNSSAVQQLHYQLSSVGYMAANQLYNCYHYSRNNES
TTAMKRQIGDYGGHPFVIDIEDAAEQNTAYRTAIWTGEHLQVTLMSIPVGDDIGLEVHNDRDQFFRIEEGDGLVQMGSRE
NNLTYRRQLSDGSAVMVPAGTWHNITNTGDEPLKLYSIYAPPEHPFGTVHQTKADALASE
>Mature_300_residues
MYYIPYYPNDLRYASQSPSITEQEKEELAKITLENLQKDAVTIQLLDQLSSSINEQPFLNTINYTREIKLRNINQLDYLY
RNITGKAPRYETEAEERSNSELGIQDIVERCIEDYEENYKASLKSNSSAVQQLHYQLSSVGYMAANQLYNCYHYSRNNES
TTAMKRQIGDYGGHPFVIDIEDAAEQNTAYRTAIWTGEHLQVTLMSIPVGDDIGLEVHNDRDQFFRIEEGDGLVQMGSRE
NNLTYRRQLSDGSAVMVPAGTWHNITNTGDEPLKLYSIYAPPEHPFGTVHQTKADALASE

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 34273; Mature: 34273

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYIPYYPNDLRYASQSPSITEQEKEELAKITLENLQKDAVTIQLLDQLSSSINEQPFLN
CEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
TINYTREIKLRNINQLDYLYRNITGKAPRYETEAEERSNSELGIQDIVERCIEDYEENYK
HCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
ASLKSNSSAVQQLHYQLSSVGYMAANQLYNCYHYSRNNESTTAMKRQIGDYGGHPFVIDI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEC
EDAAEQNTAYRTAIWTGEHLQVTLMSIPVGDDIGLEVHNDRDQFFRIEEGDGLVQMGSRE
CCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCEEEECCCC
NNLTYRRQLSDGSAVMVPAGTWHNITNTGDEPLKLYSIYAPPEHPFGTVHQTKADALASE
CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MYYIPYYPNDLRYASQSPSITEQEKEELAKITLENLQKDAVTIQLLDQLSSSINEQPFLN
CEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
TINYTREIKLRNINQLDYLYRNITGKAPRYETEAEERSNSELGIQDIVERCIEDYEENYK
HCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
ASLKSNSSAVQQLHYQLSSVGYMAANQLYNCYHYSRNNESTTAMKRQIGDYGGHPFVIDI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEC
EDAAEQNTAYRTAIWTGEHLQVTLMSIPVGDDIGLEVHNDRDQFFRIEEGDGLVQMGSRE
CCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCEEEECCCC
NNLTYRRQLSDGSAVMVPAGTWHNITNTGDEPLKLYSIYAPPEHPFGTVHQTKADALASE
CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]