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The map label for this gene is yczE [H]

Identifier: 229918423

GI number: 229918423

Start: 2681223

End: 2681870

Strand: Reverse

Name: yczE [H]

Synonym: EAT1b_2710

Alternate gene names: 229918423

Gene position: 2681870-2681223 (Counterclockwise)

Preceding gene: 229918424

Following gene: 229918420

Centisome position: 89.4

GC content: 50.46

Gene sequence:

>648_bases
GTGCACGTTCGATCTATCCACTTTTTACGTATTCTCTTCAAATGGGGTCTTTTCATGACCGGGTTGTTCTTACTCGCACT
CGGGTCATCCATTATGATTACAGCAGATCTCGGGGTGTCCACATGGGACGTCCTCCATATCGGGATTGCCCACCATCTCC
CGATTTCAATCGGAACGGTCATCTTATGCGTCGGACTTCTACTCGTCCTATTCAAATACATACTCGACCGCGTCCGTCCT
CAGTTCGGCACGCTCGTCAACGCGGTGTTTGTCGGGGTATTTATGAACTTGATTTTAAACGAGCAATGGCTCCCTGTTTT
TGAAGGGATGATGGTGAATATCATTTGGCTCACGTTCGGTATATTTGTCATGGGAATGGGGGCCGGGCTCTATGTTGCTG
TCGGATACGGGGCTGGTCCACGCGACGGATTGACGCTCGCCTTAGCAGATCGTTTCAACACGTCTGTCCGTGCCATGCGG
ACATGGATGGAACTGACCGCTTGCCTCATCGGTTGGGCACTCGGAGGACCACTTTTCTTCGGTACCGTCTTGTCGATCTT
CCTCATCGGTCCATTCTTCCAGTTCTGGTTAGAGCGATTCAGTCTGTTTATCGCCTACGTCGATCGTCTCAAAGTAAAAT
TCGCATGA

Upstream 100 bases:

>100_bases
AACCCAGCGTCTCAGCCAACAAGCTGAGGCGTTTTTTTCATGTTTTTCAATCGCCTATGCTAAGATAAATCAATCATTCT
ATTGAAACGAGGCGATGTTC

Downstream 100 bases:

>100_bases
AAAAGAGAGGGATTGCTCCCCTCTCTTTTTATGTGTTCGGAATGAGGACAATCTTTCCGAACTTGCCGGATTGTTTAAAA
TACGTCTGCGCCTCACGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MHVRSIHFLRILFKWGLFMTGLFLLALGSSIMITADLGVSTWDVLHIGIAHHLPISIGTVILCVGLLLVLFKYILDRVRP
QFGTLVNAVFVGVFMNLILNEQWLPVFEGMMVNIIWLTFGIFVMGMGAGLYVAVGYGAGPRDGLTLALADRFNTSVRAMR
TWMELTACLIGWALGGPLFFGTVLSIFLIGPFFQFWLERFSLFIAYVDRLKVKFA

Sequences:

>Translated_215_residues
MHVRSIHFLRILFKWGLFMTGLFLLALGSSIMITADLGVSTWDVLHIGIAHHLPISIGTVILCVGLLLVLFKYILDRVRP
QFGTLVNAVFVGVFMNLILNEQWLPVFEGMMVNIIWLTFGIFVMGMGAGLYVAVGYGAGPRDGLTLALADRFNTSVRAMR
TWMELTACLIGWALGGPLFFGTVLSIFLIGPFFQFWLERFSLFIAYVDRLKVKFA
>Mature_215_residues
MHVRSIHFLRILFKWGLFMTGLFLLALGSSIMITADLGVSTWDVLHIGIAHHLPISIGTVILCVGLLLVLFKYILDRVRP
QFGTLVNAVFVGVFMNLILNEQWLPVFEGMMVNIIWLTFGIFVMGMGAGLYVAVGYGAGPRDGLTLALADRFNTSVRAMR
TWMELTACLIGWALGGPLFFGTVLSIFLIGPFFQFWLERFSLFIAYVDRLKVKFA

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740 [H]

Pfam domain/function: PF02588 DUF161 [H]

EC number: NA

Molecular weight: Translated: 24071; Mature: 24071

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVRSIHFLRILFKWGLFMTGLFLLALGSSIMITADLGVSTWDVLHIGIAHHLPISIGTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHH
ILCVGLLLVLFKYILDRVRPQFGTLVNAVFVGVFMNLILNEQWLPVFEGMMVNIIWLTFG
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IFVMGMGAGLYVAVGYGAGPRDGLTLALADRFNTSVRAMRTWMELTACLIGWALGGPLFF
HHHHHCCCCEEEEEECCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHH
GTVLSIFLIGPFFQFWLERFSLFIAYVDRLKVKFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHVRSIHFLRILFKWGLFMTGLFLLALGSSIMITADLGVSTWDVLHIGIAHHLPISIGTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHH
ILCVGLLLVLFKYILDRVRPQFGTLVNAVFVGVFMNLILNEQWLPVFEGMMVNIIWLTFG
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IFVMGMGAGLYVAVGYGAGPRDGLTLALADRFNTSVRAMRTWMELTACLIGWALGGPLFF
HHHHHCCCCEEEEEECCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHH
GTVLSIFLIGPFFQFWLERFSLFIAYVDRLKVKFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]