Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229918363
Identifier: 229918363
GI number: 229918363
Start: 2616791
End: 2617543
Strand: Direct
Name: 229918363
Synonym: EAT1b_2648
Alternate gene names: NA
Gene position: 2616791-2617543 (Clockwise)
Preceding gene: 229918362
Following gene: 229918364
Centisome position: 87.23
GC content: 45.55
Gene sequence:
>753_bases ATGAGACGAATCGGCGTAATGTGTGTTCTTGTGCTGGGACTGGTGGGATGTACACCATCAGAAGAAACGAAGTCTGTGGA GACGATTGATGTGAAAAAAATAGAGAAAGTCGGGATTGATGAATCACATTTCCCCGACGTAGACGTAACCGGGACGATGA TTGCGGAAGTACCACCAGGGACAGAAAAGGTCTCGGACGCGGTCGCGGAACAAATCACTCTTCAATATGAAGATGGATCG ACAAGACAGTTGTCAAAGGATCACATTTTAACGGAGACGATGGTCGGGGGAATCGGTTTAGTTGCGATGATTGTACCTGA CCGTGAGAACCCATTTGGCGTATTCATTCATGATGAAAGAAAGGGATGGGCACAGCGTGGCATGCAACGCTTTGGGATTC CAAAGACATCAACTGCATTTGTTCACGGATTAGATCTCCCTAATAAAGAGATGGAGGCCATCAGCACTGATTATTCAGGT AGCGATTGGCCGGTGAAGCTTTGGACGTTATACGATGAGACACACCTCATCAGTATCATTGCGACGGATTCTTTTACTGA GGTAGAAGGAGAGATGTCGGAACAGCCAGAACCGTATGTATTGGAGCAATCTTACGGGAACGGTTTATACTATTTATCCC AAGGCAAACTGATTATCGTGACAGGAAATATCTCGGAAGAAGAGTTGTTGAAGCTAGTTGATTCTTTACCAGAGCCTTCA TCTGTGTCGTTTCCCTTTCATGATTCGGAGTAA
Upstream 100 bases:
>100_bases AAGTAAGATATACACCTTCTTTGGAGATTGATTCTCTGAAGAAGGTTTTTTTGTATTTTGGTAGAATTTGGAGAGATGGA CGTAGAAAAGGGGATATGAG
Downstream 100 bases:
>100_bases GGGTGAACACACACTTATAGAATCGATGAAAAGGAGTGGACATGTTGCTCAATCGAAAGGAAACGATCCTACGAATTCGT AATGCTGAAATGAATGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRRIGVMCVLVLGLVGCTPSEETKSVETIDVKKIEKVGIDESHFPDVDVTGTMIAEVPPGTEKVSDAVAEQITLQYEDGS TRQLSKDHILTETMVGGIGLVAMIVPDRENPFGVFIHDERKGWAQRGMQRFGIPKTSTAFVHGLDLPNKEMEAISTDYSG SDWPVKLWTLYDETHLISIIATDSFTEVEGEMSEQPEPYVLEQSYGNGLYYLSQGKLIIVTGNISEEELLKLVDSLPEPS SVSFPFHDSE
Sequences:
>Translated_250_residues MRRIGVMCVLVLGLVGCTPSEETKSVETIDVKKIEKVGIDESHFPDVDVTGTMIAEVPPGTEKVSDAVAEQITLQYEDGS TRQLSKDHILTETMVGGIGLVAMIVPDRENPFGVFIHDERKGWAQRGMQRFGIPKTSTAFVHGLDLPNKEMEAISTDYSG SDWPVKLWTLYDETHLISIIATDSFTEVEGEMSEQPEPYVLEQSYGNGLYYLSQGKLIIVTGNISEEELLKLVDSLPEPS SVSFPFHDSE >Mature_250_residues MRRIGVMCVLVLGLVGCTPSEETKSVETIDVKKIEKVGIDESHFPDVDVTGTMIAEVPPGTEKVSDAVAEQITLQYEDGS TRQLSKDHILTETMVGGIGLVAMIVPDRENPFGVFIHDERKGWAQRGMQRFGIPKTSTAFVHGLDLPNKEMEAISTDYSG SDWPVKLWTLYDETHLISIIATDSFTEVEGEMSEQPEPYVLEQSYGNGLYYLSQGKLIIVTGNISEEELLKLVDSLPEPS SVSFPFHDSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27642; Mature: 27642
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIGVMCVLVLGLVGCTPSEETKSVETIDVKKIEKVGIDESHFPDVDVTGTMIAEVPPG CCHHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEECCCC TEKVSDAVAEQITLQYEDGSTRQLSKDHILTETMVGGIGLVAMIVPDRENPFGVFIHDER HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCC KGWAQRGMQRFGIPKTSTAFVHGLDLPNKEMEAISTDYSGSDWPVKLWTLYDETHLISII CCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEE ATDSFTEVEGEMSEQPEPYVLEQSYGNGLYYLSQGKLIIVTGNISEEELLKLVDSLPEPS ECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEECCCCHHHHHHHHHCCCCCC SVSFPFHDSE CEECCCCCCC >Mature Secondary Structure MRRIGVMCVLVLGLVGCTPSEETKSVETIDVKKIEKVGIDESHFPDVDVTGTMIAEVPPG CCHHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEECCCC TEKVSDAVAEQITLQYEDGSTRQLSKDHILTETMVGGIGLVAMIVPDRENPFGVFIHDER HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCC KGWAQRGMQRFGIPKTSTAFVHGLDLPNKEMEAISTDYSGSDWPVKLWTLYDETHLISII CCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEE ATDSFTEVEGEMSEQPEPYVLEQSYGNGLYYLSQGKLIIVTGNISEEELLKLVDSLPEPS ECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEECCCCHHHHHHHHHCCCCCC SVSFPFHDSE CEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA