Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918254
Identifier: 229918254
GI number: 229918254
Start: 2496129
End: 2496866
Strand: Reverse
Name: 229918254
Synonym: EAT1b_2536
Alternate gene names: NA
Gene position: 2496866-2496129 (Counterclockwise)
Preceding gene: 229918255
Following gene: 229918253
Centisome position: 83.23
GC content: 48.24
Gene sequence:
>738_bases ATGCGTTCATTACTCAGCAATGAATGGATGAAATGGCGTCGGACGATTAAACCATACGTCGCCCTAGGCGTGTATACAGC AATCATCCTCATCGTATACGCTGTATTAGCAAGCGGAGACGGGACACCAGAAGCGGCATCGTTCTTTGAATTTTCAACGA TGGGTGCCATCGCTTTCTTGAGTATCTTTACGATTGTCTTTACGGCAGAGATGGTCGGGAACGAATTGAAATTTGATACG TTGAAACACCTGTTGATGAGCCCGTACTCTCGCGACCGCATCTTATTGTCGAAGCTCGTCATGGCCGTCCTCGTCATGTT GCTTCAATTCGTCTTTATCTTAGTCGTCGCGTTCGGGTTCTCACTCACGTTAGATGGCTCTGTCACATGGGAGGTCGTCC GTCCGATCCTCATCAGTGTGAGCGGACCGATCTTCATCATCTTCTTGACGCTCATGTTCTCGGTCGTCTTCAAGTCGGTC GGCGTCGTCATCGGTTTCACGGTACTCGCGAACTTCGCCTCAAGTATCATCGGCGGTCTTCTCGTTGCTTGGAAACCTGA GCTTGCGAAATGGATTGTCTTCTTGCATACAGACCTTTCCATCTATGACGTTAACCCAGAGTTTATGAAAGCAATGGACG CTACGATGGGCTTCTCGATTTTCTATGTCGCCCTTCATATCATCGCCTTCTATCTCATCACGGCATTTATGTTCCGCAGT AAAACGTTTGCGGAATAA
Upstream 100 bases:
>100_bases TTAATCGAGCGCGATATCGCCGTCTATCAGATTGGCATGAAACACGAGTCACTCGAAGAACAATTCTTGAAATTGACGAA AAAAGAAGGAGGTACAAACA
Downstream 100 bases:
>100_bases GCATACTTCAAATGAAAAAGTGGTACCTCTTTGCTATAGGAGTTTTATAGTAAGGAGGTATTTCTATGTCTAAAACGGCA TTACTCATTATTGATTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MRSLLSNEWMKWRRTIKPYVALGVYTAIILIVYAVLASGDGTPEAASFFEFSTMGAIAFLSIFTIVFTAEMVGNELKFDT LKHLLMSPYSRDRILLSKLVMAVLVMLLQFVFILVVAFGFSLTLDGSVTWEVVRPILISVSGPIFIIFLTLMFSVVFKSV GVVIGFTVLANFASSIIGGLLVAWKPELAKWIVFLHTDLSIYDVNPEFMKAMDATMGFSIFYVALHIIAFYLITAFMFRS KTFAE
Sequences:
>Translated_245_residues MRSLLSNEWMKWRRTIKPYVALGVYTAIILIVYAVLASGDGTPEAASFFEFSTMGAIAFLSIFTIVFTAEMVGNELKFDT LKHLLMSPYSRDRILLSKLVMAVLVMLLQFVFILVVAFGFSLTLDGSVTWEVVRPILISVSGPIFIIFLTLMFSVVFKSV GVVIGFTVLANFASSIIGGLLVAWKPELAKWIVFLHTDLSIYDVNPEFMKAMDATMGFSIFYVALHIIAFYLITAFMFRS KTFAE >Mature_245_residues MRSLLSNEWMKWRRTIKPYVALGVYTAIILIVYAVLASGDGTPEAASFFEFSTMGAIAFLSIFTIVFTAEMVGNELKFDT LKHLLMSPYSRDRILLSKLVMAVLVMLLQFVFILVVAFGFSLTLDGSVTWEVVRPILISVSGPIFIIFLTLMFSVVFKSV GVVIGFTVLANFASSIIGGLLVAWKPELAKWIVFLHTDLSIYDVNPEFMKAMDATMGFSIFYVALHIIAFYLITAFMFRS KTFAE
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27431; Mature: 27431
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLLSNEWMKWRRTIKPYVALGVYTAIILIVYAVLASGDGTPEAASFFEFSTMGAIAFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SIFTIVFTAEMVGNELKFDTLKHLLMSPYSRDRILLSKLVMAVLVMLLQFVFILVVAFGF HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLTLDGSVTWEVVRPILISVSGPIFIIFLTLMFSVVFKSVGVVIGFTVLANFASSIIGGL CEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAWKPELAKWIVFLHTDLSIYDVNPEFMKAMDATMGFSIFYVALHIIAFYLITAFMFRS HHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTFAE HHCCC >Mature Secondary Structure MRSLLSNEWMKWRRTIKPYVALGVYTAIILIVYAVLASGDGTPEAASFFEFSTMGAIAFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SIFTIVFTAEMVGNELKFDTLKHLLMSPYSRDRILLSKLVMAVLVMLLQFVFILVVAFGF HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SLTLDGSVTWEVVRPILISVSGPIFIIFLTLMFSVVFKSVGVVIGFTVLANFASSIIGGL CEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAWKPELAKWIVFLHTDLSIYDVNPEFMKAMDATMGFSIFYVALHIIAFYLITAFMFRS HHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTFAE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA