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The map label for this gene is cdaR [C]

Identifier: 229918162

GI number: 229918162

Start: 2400382

End: 2401224

Strand: Reverse

Name: cdaR [C]

Synonym: EAT1b_2442

Alternate gene names: 229918162

Gene position: 2401224-2400382 (Counterclockwise)

Preceding gene: 229918167

Following gene: 229918161

Centisome position: 80.04

GC content: 47.21

Gene sequence:

>843_bases
TTGAATACGTTTGATCGTATTAAATCGATTTTTCCGACTGCTGTCCATCGGTCGGAAGATGCATCTGGTGACCTTGATTG
GTTCGAGACGCAAGATGGTACCCTATTCGGACTCCCCGCGTTCGAACTGAGCGAACGCGAACAAAAGCTGTTGGCGCTGT
GGGCGACGCCAATCCTTCAATCTGATCCCCATCAGCGAAAATGGCAAGCAACCCTTCAAGATGAGACGTTTCGTTTTGAG
CAACCGTTTCGGCTCATCTCTCTTTCTCTCCAAGAAGCGGAAGAAGAAGCGTTCGAATCCTTCGTTAGTATCGTCCGTGA
CTTTATGCCGCATGCCGAGGTCATCTTGATGTCGACACGACATATCGAGCTGATTGAACAAAATCCATTCGTCGATCTTC
AGGAGTTTGAGGACGTATTGCGCGCCATTGCGAGTGACTGTTTTATCGAGGCACATGCAATCTATAGCGAACGTCCGCAA
GGCTCGCTCGCCCATGTGTATCGTCAACATCAATTACTCATGCCATACGCACGTATGTCTACTAAAACTTACCCTGCTAG
TCAATTATTATACCATTATTTACTACAGCAGCAGGACTTAAAAGAACGGATGCATATCACTGCCCCGTTAATGCAAATGC
TCGATTTATCGACGATCGAATTATTAGAGGCGTTGTTTCGTCACTCGTTGAATGTCTCGCATACCGCCAAAGCACTGTTC
ATGCATCGAAACACGCTAAATTATCGGCTCGATCGCCTATTCGAGACGACGGGTTACGATGCTCGAACGTTCTATGACGC
CAGCCTTCTTCAACTCATGGTCATGTTGCACAAATCCGATTGA

Upstream 100 bases:

>100_bases
TGGTCGCCCCGATCAATATCATGAGTAAAATCTTTAATAACTCGTCCAAACTGCAAGCCTCCGATCTGAAATATGATACA
TTGTTGTTGAGGTGATAGTA

Downstream 100 bases:

>100_bases
CGGTTTTTGTGCAACTTGTCCATATTCAATGCAAGCGGTTTCATCATATAATCGTTCTTGTAAGCGCTATTATATACACA
TAGATTCTTTAGGAGGCTAA

Product: PucR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PucR Family; PucR Family Transcriptional Regulator

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNTFDRIKSIFPTAVHRSEDASGDLDWFETQDGTLFGLPAFELSEREQKLLALWATPILQSDPHQRKWQATLQDETFRFE
QPFRLISLSLQEAEEEAFESFVSIVRDFMPHAEVILMSTRHIELIEQNPFVDLQEFEDVLRAIASDCFIEAHAIYSERPQ
GSLAHVYRQHQLLMPYARMSTKTYPASQLLYHYLLQQQDLKERMHITAPLMQMLDLSTIELLEALFRHSLNVSHTAKALF
MHRNTLNYRLDRLFETTGYDARTFYDASLLQLMVMLHKSD

Sequences:

>Translated_280_residues
MNTFDRIKSIFPTAVHRSEDASGDLDWFETQDGTLFGLPAFELSEREQKLLALWATPILQSDPHQRKWQATLQDETFRFE
QPFRLISLSLQEAEEEAFESFVSIVRDFMPHAEVILMSTRHIELIEQNPFVDLQEFEDVLRAIASDCFIEAHAIYSERPQ
GSLAHVYRQHQLLMPYARMSTKTYPASQLLYHYLLQQQDLKERMHITAPLMQMLDLSTIELLEALFRHSLNVSHTAKALF
MHRNTLNYRLDRLFETTGYDARTFYDASLLQLMVMLHKSD
>Mature_280_residues
MNTFDRIKSIFPTAVHRSEDASGDLDWFETQDGTLFGLPAFELSEREQKLLALWATPILQSDPHQRKWQATLQDETFRFE
QPFRLISLSLQEAEEEAFESFVSIVRDFMPHAEVILMSTRHIELIEQNPFVDLQEFEDVLRAIASDCFIEAHAIYSERPQ
GSLAHVYRQHQLLMPYARMSTKTYPASQLLYHYLLQQQDLKERMHITAPLMQMLDLSTIELLEALFRHSLNVSHTAKALF
MHRNTLNYRLDRLFETTGYDARTFYDASLLQLMVMLHKSD

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32818; Mature: 32818

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFDRIKSIFPTAVHRSEDASGDLDWFETQDGTLFGLPAFELSEREQKLLALWATPILQ
CCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHC
SDPHQRKWQATLQDETFRFEQPFRLISLSLQEAEEEAFESFVSIVRDFMPHAEVILMSTR
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
HIELIEQNPFVDLQEFEDVLRAIASDCFIEAHAIYSERPQGSLAHVYRQHQLLMPYARMS
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
TKTYPASQLLYHYLLQQQDLKERMHITAPLMQMLDLSTIELLEALFRHSLNVSHTAKALF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
MHRNTLNYRLDRLFETTGYDARTFYDASLLQLMVMLHKSD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTFDRIKSIFPTAVHRSEDASGDLDWFETQDGTLFGLPAFELSEREQKLLALWATPILQ
CCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHC
SDPHQRKWQATLQDETFRFEQPFRLISLSLQEAEEEAFESFVSIVRDFMPHAEVILMSTR
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
HIELIEQNPFVDLQEFEDVLRAIASDCFIEAHAIYSERPQGSLAHVYRQHQLLMPYARMS
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
TKTYPASQLLYHYLLQQQDLKERMHITAPLMQMLDLSTIELLEALFRHSLNVSHTAKALF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
MHRNTLNYRLDRLFETTGYDARTFYDASLLQLMVMLHKSD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA