Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918037
Identifier: 229918037
GI number: 229918037
Start: 2267407
End: 2268207
Strand: Reverse
Name: 229918037
Synonym: EAT1b_2316
Alternate gene names: NA
Gene position: 2268207-2267407 (Counterclockwise)
Preceding gene: 229918041
Following gene: 229918036
Centisome position: 75.61
GC content: 47.69
Gene sequence:
>801_bases TTGATTCAAGCGAAGCTGCAATCCTTTACTGTATACGAAAGCGCGTTGATGCGAACGACATCGACCCTCATCGATACACC GGATGCCCTATTATTGATTGATCCGACCTGGCTCCCGGAAGAAATCGCGACGATTCGGCGTGACATCGAGTTACAGCGTC GCAATCGTCCGCTTTATGTCATCTTCACACACCATCATTTTGATCACATCATTGGAGCTTACGGCTTTTCAGATGCAACA ACGATCGCCTCACAGGCTTTCGTCGATGCAGACTCATCTGACCAACTAAATGAGATTCGCGAGTTTTATGAACAGTATTA CATTGATCACCCGATTCAAAAACCTGACATCGACCTGGTCATCCAACCCGATCAAACGATTTTAATCGGTTCGGTGCCCG TAACCTTCCTTTCTACACCCGGTCATGATGCCACACATATGTCCGTTCTAATCGAATCCATGAATCTTCTCGTCTGTGGG GATTACGGTTCCAATGTCGAGCCACCATTTATCGAACACGACCCAACCGCCTATCTTGATACGCTACAAACCTTACAATC ACTCATCTACGAACATGAGATTCGTTGGTTCGTACCAGGTCACGGTGACTTGTGTGACAGCCGAAGTCACATGATTGAGC GATTGAGTGCGGCGGAAGAGTATATCTTGGCACTCCCTGAAGAACGCCACTGGTCCCCTTCATGGCCAGAGCACGCCTTT TTTGACCGTGTTCATGAACGGAATCGAAAGATGGTGGAACAAAAAGAGACCGATCGCCGGTCTCGACAACAAGATATATA A
Upstream 100 bases:
>100_bases GCAAAAGCAGAAAGTCACACGACTTTCTGCTTTTTTGTTGTTCCATCCATTGTTTTGGGGAAAAGAGAGATTGAATCCAT ACAGACAAGGAGGAACCCCA
Downstream 100 bases:
>100_bases AAAAATCGCAACGTCTCCCCAAGACGTTGCGATTTCCCCCTATGTAGACCTATTTCTTTGTGACGCGTTCTGAGCGGACC GTGAACATACGGTCAACCCC
Product: beta-lactamase domain protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MIQAKLQSFTVYESALMRTTSTLIDTPDALLLIDPTWLPEEIATIRRDIELQRRNRPLYVIFTHHHFDHIIGAYGFSDAT TIASQAFVDADSSDQLNEIREFYEQYYIDHPIQKPDIDLVIQPDQTILIGSVPVTFLSTPGHDATHMSVLIESMNLLVCG DYGSNVEPPFIEHDPTAYLDTLQTLQSLIYEHEIRWFVPGHGDLCDSRSHMIERLSAAEEYILALPEERHWSPSWPEHAF FDRVHERNRKMVEQKETDRRSRQQDI
Sequences:
>Translated_266_residues MIQAKLQSFTVYESALMRTTSTLIDTPDALLLIDPTWLPEEIATIRRDIELQRRNRPLYVIFTHHHFDHIIGAYGFSDAT TIASQAFVDADSSDQLNEIREFYEQYYIDHPIQKPDIDLVIQPDQTILIGSVPVTFLSTPGHDATHMSVLIESMNLLVCG DYGSNVEPPFIEHDPTAYLDTLQTLQSLIYEHEIRWFVPGHGDLCDSRSHMIERLSAAEEYILALPEERHWSPSWPEHAF FDRVHERNRKMVEQKETDRRSRQQDI >Mature_266_residues MIQAKLQSFTVYESALMRTTSTLIDTPDALLLIDPTWLPEEIATIRRDIELQRRNRPLYVIFTHHHFDHIIGAYGFSDAT TIASQAFVDADSSDQLNEIREFYEQYYIDHPIQKPDIDLVIQPDQTILIGSVPVTFLSTPGHDATHMSVLIESMNLLVCG DYGSNVEPPFIEHDPTAYLDTLQTLQSLIYEHEIRWFVPGHGDLCDSRSHMIERLSAAEEYILALPEERHWSPSWPEHAF FDRVHERNRKMVEQKETDRRSRQQDI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30875; Mature: 30875
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQAKLQSFTVYESALMRTTSTLIDTPDALLLIDPTWLPEEIATIRRDIELQRRNRPLYV CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE IFTHHHFDHIIGAYGFSDATTIASQAFVDADSSDQLNEIREFYEQYYIDHPIQKPDIDLV EEECCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE IQPDQTILIGSVPVTFLSTPGHDATHMSVLIESMNLLVCGDYGSNVEPPFIEHDPTAYLD ECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHH TLQTLQSLIYEHEIRWFVPGHGDLCDSRSHMIERLSAAEEYILALPEERHWSPSWPEHAF HHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH FDRVHERNRKMVEQKETDRRSRQQDI HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIQAKLQSFTVYESALMRTTSTLIDTPDALLLIDPTWLPEEIATIRRDIELQRRNRPLYV CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE IFTHHHFDHIIGAYGFSDATTIASQAFVDADSSDQLNEIREFYEQYYIDHPIQKPDIDLV EEECCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE IQPDQTILIGSVPVTFLSTPGHDATHMSVLIESMNLLVCGDYGSNVEPPFIEHDPTAYLD ECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHH TLQTLQSLIYEHEIRWFVPGHGDLCDSRSHMIERLSAAEEYILALPEERHWSPSWPEHAF HHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH FDRVHERNRKMVEQKETDRRSRQQDI HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA