Click here to switch to the map view.

The map label for this gene is 229917892

Identifier: 229917892

GI number: 229917892

Start: 2107239

End: 2107847

Strand: Reverse

Name: 229917892

Synonym: EAT1b_2170

Alternate gene names: NA

Gene position: 2107847-2107239 (Counterclockwise)

Preceding gene: 229917895

Following gene: 229917885

Centisome position: 70.26

GC content: 48.44

Gene sequence:

>609_bases
ATGGAACAAACTGACTTACGCGTCATCCGGACGAAGAAGCTGATCAAAGATGCCTTCTTTAGTCTCATTGAGGAACAGGG
ATTTGAGGCCGTCACCGTCAAGCAATTGACTGAACGAGCCGGCATCAATCGAGGCACCTTTTATAGTCACTATGTGGATA
AGTTCGAATTGATGGAAAAATGCGTCAACGAAATCTTTGAAGAGGCTGAACGGAAGTTGATTCATCATCTCCCCCACATC
TTTGGAGACGAGCGAACCGACAACTCGTACCATTACCTCGTCCCGTTCATCCGCTTCATCGAAGACAACCAAATCATCAT
GAAGCCGCTCCTCGGACCGAACGGAGACCCGATGTTCCAGGCAAAACTTCGAAAATTTATGCAAGCTGCCTTGTTTCAGC
GCTCGCCTGTAACCTTGTTTAATCCGGATAAGATGCTGGTCCCGCCTCCATATCTCGTCGCCTATCTTTCTTCGGCTCAC
ATGGGCGTCATCTATGAGTGGTTAAACAATCCGTCTTCGGAAGAGACAGCGGAAGACATCGCCCGGATTATCTATACGAT
CACCTATGAAGGACCGCTCGTTGCCGGCGGTGTGAATCTACGAAAATAA

Upstream 100 bases:

>100_bases
AGTATAGTTCCCGTTCACGGTGGCAACAATCGTCAATATCGGTCATCGTGTCGGTTTTCCGACAGATGGAATGAATGTGT
TGAGGAAAAGGAGAAATAAT

Downstream 100 bases:

>100_bases
GGACAGGTGCTTTACCTGTCCTCCTTTGGAAAGACGACCTTCGCCGTTGTCCCAATCTGTTTCTCACTCGATAATGTAAT
CTCTCCACCATGTAACTGTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory Protein; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; Transcriptional Regulator TetR/AcrR Family Protein; AcrR Family Transcriptional Regulator; Regulatory Protein TetR Family; Transcription Regulator

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEQTDLRVIRTKKLIKDAFFSLIEEQGFEAVTVKQLTERAGINRGTFYSHYVDKFELMEKCVNEIFEEAERKLIHHLPHI
FGDERTDNSYHYLVPFIRFIEDNQIIMKPLLGPNGDPMFQAKLRKFMQAALFQRSPVTLFNPDKMLVPPPYLVAYLSSAH
MGVIYEWLNNPSSEETAEDIARIIYTITYEGPLVAGGVNLRK

Sequences:

>Translated_202_residues
MEQTDLRVIRTKKLIKDAFFSLIEEQGFEAVTVKQLTERAGINRGTFYSHYVDKFELMEKCVNEIFEEAERKLIHHLPHI
FGDERTDNSYHYLVPFIRFIEDNQIIMKPLLGPNGDPMFQAKLRKFMQAALFQRSPVTLFNPDKMLVPPPYLVAYLSSAH
MGVIYEWLNNPSSEETAEDIARIIYTITYEGPLVAGGVNLRK
>Mature_202_residues
MEQTDLRVIRTKKLIKDAFFSLIEEQGFEAVTVKQLTERAGINRGTFYSHYVDKFELMEKCVNEIFEEAERKLIHHLPHI
FGDERTDNSYHYLVPFIRFIEDNQIIMKPLLGPNGDPMFQAKLRKFMQAALFQRSPVTLFNPDKMLVPPPYLVAYLSSAH
MGVIYEWLNNPSSEETAEDIARIIYTITYEGPLVAGGVNLRK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23417; Mature: 23417

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTDLRVIRTKKLIKDAFFSLIEEQGFEAVTVKQLTERAGINRGTFYSHYVDKFELMEK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CVNEIFEEAERKLIHHLPHIFGDERTDNSYHYLVPFIRFIEDNQIIMKPLLGPNGDPMFQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
AKLRKFMQAALFQRSPVTLFNPDKMLVPPPYLVAYLSSAHMGVIYEWLNNPSSEETAEDI
HHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHH
ARIIYTITYEGPLVAGGVNLRK
HHHHHHEEECCCEEECCCCCCC
>Mature Secondary Structure
MEQTDLRVIRTKKLIKDAFFSLIEEQGFEAVTVKQLTERAGINRGTFYSHYVDKFELMEK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CVNEIFEEAERKLIHHLPHIFGDERTDNSYHYLVPFIRFIEDNQIIMKPLLGPNGDPMFQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
AKLRKFMQAALFQRSPVTLFNPDKMLVPPPYLVAYLSSAHMGVIYEWLNNPSSEETAEDI
HHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHH
ARIIYTITYEGPLVAGGVNLRK
HHHHHHEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA