Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229917867
Identifier: 229917867
GI number: 229917867
Start: 2090132
End: 2090563
Strand: Reverse
Name: 229917867
Synonym: EAT1b_2145
Alternate gene names: NA
Gene position: 2090563-2090132 (Counterclockwise)
Preceding gene: 229917868
Following gene: 229917865
Centisome position: 69.69
GC content: 46.76
Gene sequence:
>432_bases TTGAATGAAACACGAAAGCAACAAGTCCTCACGATGTATCGCCAAATCGATGAGCTTGACTTGCTGTTCACGAAATATTT CACGGAATTGAACGAATTCGAGCTGAGTTATCAACAAGAACAGATGCTACTTCTCTTTAAACGCCAAGAGACGTGGACGA CGACAGAGATTGCGATGAAGATGTCCATCTCCAAAAGTGCCGTCAGTCAGGTGCTCAAAGTGCTCGAACAACGTGACTTC GTCGCGCGGGAAAAGAATCCTGAGAACCTTCGAGAAAGCTTCATCCGACTTGGCCCGAACGGCCTGGCGTACTCGAAGCA AATCGATGCGATTGAAGAACGCCTTGCTGAAGAGATGTTCTCCGTCCTCGAGGATGACGAGATGAAGATGATCAACCGTT CGCTAGCGTTGATGATTCAGAAATTCAAATAA
Upstream 100 bases:
>100_bases TTGCTGGCGTTTGGTATAATCGGATTAGTTTGTGGTGTCCTCTTATATCTACAGAGCGAAACGTTCCGACAGACACCGTA AAGAAAGGATGAATGACACG
Downstream 100 bases:
>100_bases AAAAGACAAATCACCGCTAGTCGGACGATTTGTCTTTTCGTTATACCAACCCTTGTACGATTCGATTCGCCGACCGCAAT GCCCCTTCGATATGTCCCCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNETRKQQVLTMYRQIDELDLLFTKYFTELNEFELSYQQEQMLLLFKRQETWTTTEIAMKMSISKSAVSQVLKVLEQRDF VAREKNPENLRESFIRLGPNGLAYSKQIDAIEERLAEEMFSVLEDDEMKMINRSLALMIQKFK
Sequences:
>Translated_143_residues MNETRKQQVLTMYRQIDELDLLFTKYFTELNEFELSYQQEQMLLLFKRQETWTTTEIAMKMSISKSAVSQVLKVLEQRDF VAREKNPENLRESFIRLGPNGLAYSKQIDAIEERLAEEMFSVLEDDEMKMINRSLALMIQKFK >Mature_143_residues MNETRKQQVLTMYRQIDELDLLFTKYFTELNEFELSYQQEQMLLLFKRQETWTTTEIAMKMSISKSAVSQVLKVLEQRDF VAREKNPENLRESFIRLGPNGLAYSKQIDAIEERLAEEMFSVLEDDEMKMINRSLALMIQKFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17075; Mature: 17075
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETRKQQVLTMYRQIDELDLLFTKYFTELNEFELSYQQEQMLLLFKRQETWTTTEIAMK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MSISKSAVSQVLKVLEQRDFVAREKNPENLRESFIRLGPNGLAYSKQIDAIEERLAEEMF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SVLEDDEMKMINRSLALMIQKFK HHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNETRKQQVLTMYRQIDELDLLFTKYFTELNEFELSYQQEQMLLLFKRQETWTTTEIAMK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH MSISKSAVSQVLKVLEQRDFVAREKNPENLRESFIRLGPNGLAYSKQIDAIEERLAEEMF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SVLEDDEMKMINRSLALMIQKFK HHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA