Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is yajQ [C]
Identifier: 229917759
GI number: 229917759
Start: 1990961
End: 1991452
Strand: Reverse
Name: yajQ [C]
Synonym: EAT1b_2037
Alternate gene names: 229917759
Gene position: 1991452-1990961 (Counterclockwise)
Preceding gene: 229917761
Following gene: 229917758
Centisome position: 66.38
GC content: 44.92
Gene sequence:
>492_bases ATGGCAAAAGACAATTCTTTCGATATCGTGTCAGAAATGAATCTTGAAGAAGTGAAGAACGCAATCCAAATCGCGGAGAA GGAAATTTTGAACCGCTACGACTTTAAAGGCTCAAAGAGTGAGATGTCGCTCGACAATGGCGACCTCGTCCTCATCTCGG ATGACGACTACAAACTCGAGCAATTAAAAGACGTCTTGATCACGAAATTGATCAAGCGCGGTGTCCCGACAAAAAACCTC GACTATCAAAAAGTAGAGAATGCACTCGGCGGAACAGTTCGCCAACGTGTGAAACTAAAGAGCGGCATCGACAAAGATGA CGCGAAAAAAATCAATAACGCCATCAAGGAATCAAAACTTAAAGTCAAATCGCAAATTCAAGACGATCAAATCCGCGTGA CAGGGAAATCACGTGACGATCTTCAGGCCGTCATGCAGCTCGTTCGTGAACTCGAGTTGTCCGTTGATGCCCAATTCACG AACTTCCGATGA
Upstream 100 bases:
>100_bases ACATGTGTGTGTTGATCCATTGTACGTTCCATCTCTTCACTCCTTCACTGCTTCAAATCTGCTATCATTATAACAAAACC ACACAAAGGATGGATGAAAC
Downstream 100 bases:
>100_bases AACTCGCGATCATCAGTGACCCGCACGGTTCGTTTGATGATTTGAAGGCCGTTCTCGATGATGTTCGGCGAGAAACCGAG CATATTCTCTGTCTCGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAKDNSFDIVSEMNLEEVKNAIQIAEKEILNRYDFKGSKSEMSLDNGDLVLISDDDYKLEQLKDVLITKLIKRGVPTKNL DYQKVENALGGTVRQRVKLKSGIDKDDAKKINNAIKESKLKVKSQIQDDQIRVTGKSRDDLQAVMQLVRELELSVDAQFT NFR
Sequences:
>Translated_163_residues MAKDNSFDIVSEMNLEEVKNAIQIAEKEILNRYDFKGSKSEMSLDNGDLVLISDDDYKLEQLKDVLITKLIKRGVPTKNL DYQKVENALGGTVRQRVKLKSGIDKDDAKKINNAIKESKLKVKSQIQDDQIRVTGKSRDDLQAVMQLVRELELSVDAQFT NFR >Mature_162_residues AKDNSFDIVSEMNLEEVKNAIQIAEKEILNRYDFKGSKSEMSLDNGDLVLISDDDYKLEQLKDVLITKLIKRGVPTKNLD YQKVENALGGTVRQRVKLKSGIDKDDAKKINNAIKESKLKVKSQIQDDQIRVTGKSRDDLQAVMQLVRELELSVDAQFTN FR
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family
Homologues:
Organism=Escherichia coli, GI87081737, Length=160, Percent_Identity=46.25, Blast_Score=131, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2037_EXISA (C4L0Z7)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002886405.1 - GeneID: 7868844 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_2037 - OMA: LQFTNYR - ProtClustDB: CLSK2489979 - HAMAP: MF_00632 - InterPro: IPR007551
Pfam domain/function: PF04461 DUF520
EC number: NA
Molecular weight: Translated: 18575; Mature: 18444
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDNSFDIVSEMNLEEVKNAIQIAEKEILNRYDFKGSKSEMSLDNGDLVLISDDDYKLE CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHH QLKDVLITKLIKRGVPTKNLDYQKVENALGGTVRQRVKLKSGIDKDDAKKINNAIKESKL HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KVKSQIQDDQIRVTGKSRDDLQAVMQLVRELELSVDAQFTNFR HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKDNSFDIVSEMNLEEVKNAIQIAEKEILNRYDFKGSKSEMSLDNGDLVLISDDDYKLE CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHH QLKDVLITKLIKRGVPTKNLDYQKVENALGGTVRQRVKLKSGIDKDDAKKINNAIKESKL HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KVKSQIQDDQIRVTGKSRDDLQAVMQLVRELELSVDAQFTNFR HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA