Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is yxaH [H]
Identifier: 229917696
GI number: 229917696
Start: 1930817
End: 1931944
Strand: Reverse
Name: yxaH [H]
Synonym: EAT1b_1973
Alternate gene names: 229917696
Gene position: 1931944-1930817 (Counterclockwise)
Preceding gene: 229917697
Following gene: 229917695
Centisome position: 64.4
GC content: 48.76
Gene sequence:
>1128_bases ATGGCTGGCCCAATTCAAACGAATGAACGGATTATCTTGTATGACATTATCCGAGGGTTTGCCCTCTGCGGCATTTTCCT CGTCAATATCCCGAGCATGCTCGGGAGCGACTGGATGTTCGGTCGTCCCGATTATTACGGGAGCGACCTGTTCGTCCGCA CACTCTTCGATTTGTTCGTGCAGACGAAGTTTTATACGATTTTCTCCCTCTTATTCGGGATCGGCTTTTCGATTTTCCTC GAGCGTTCTTACGCTCGTGGCGAATCGGTCAGTCGTTACATACGCCGGATTTTGATTCTCTTCTTGTTCGGTCTGGCACA CCTGGCTATTTGGTCAGGGGATATCCTCCATACGTACGCCATGTGGGGCTTATTGCTTCCCCTCTTTTACGGATTGAGCA ACCGCGCCATTCTGGCGTGGGCGTGGAGTTTATTGATTGGAAGTTTCTTCTTATTTTATGGATCATCTGCACTTGTGGAA TGGGCAAATGGCGGTGACTTCGATAGTGGCGCTCCATTTCCGACACCATATAATATGGGATTCGGCATTTGGTTCGACTA CCGTCTACAAATTGAAATATTCGCTGCTATGTCGAATTCACTTCTTGTAGGTATTGAGATTCTTAGCTTGTTCTTGTTCG GTCTTTATATCGGACGAGAACGAAAACTTCTCACATGGTCGATTCAAGGATTGACTCGTACTGCGACCATTTGTGTCCTC TTCACTCTGCCATTTTTCGGGGTCATCATCTGGCATCATTATGGTCAAGGCGAGGCCTATTACTGGGTGAATCTTGTTGC TGTTCTCGTCTCCGGAAAACTGCTCGCTACAACGTACATCTGCCTGTTCACCATCGCCGTTCGAAAAGGTCGGACGTTCG CCCCGCTTCAAGCGCTCGGACGAATGGCACTCACGAACTATCTGACACATACGTTGATCATTGTCTTGCCAGTGATCGCA CTCGGGGCGTACGGGGCGCTTTCCTTAACCGAAGGTCTATTCCTCAGCATCGCCATTTTGATTGCGCAGTCGTTCTTCTC GATGTGGTGGCTAAAGACTCACCGCTACGGACCGTTTGAGAAACTATGGCGTCTCGGAACATACGGACGACAAACAAAAT CATCCTAA
Upstream 100 bases:
>100_bases TCAGTCACGAACCAGAATTCTATGAGGATATCGTCACAGACGTCTGGAACTGTGAATCGTGGACGACGAAAGTATTCTAA TTCAGTAAAGGACGTGTCGT
Downstream 100 bases:
>100_bases GATCGGACTTCATTGTCCGGTCTTTTTTTTGTACAGGTAGGAAATCCCAGATTCACATGCTATTCTGATGAAGGAAAACG CTTGCATGAATGAGGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAGPIQTNERIILYDIIRGFALCGIFLVNIPSMLGSDWMFGRPDYYGSDLFVRTLFDLFVQTKFYTIFSLLFGIGFSIFL ERSYARGESVSRYIRRILILFLFGLAHLAIWSGDILHTYAMWGLLLPLFYGLSNRAILAWAWSLLIGSFFLFYGSSALVE WANGGDFDSGAPFPTPYNMGFGIWFDYRLQIEIFAAMSNSLLVGIEILSLFLFGLYIGRERKLLTWSIQGLTRTATICVL FTLPFFGVIIWHHYGQGEAYYWVNLVAVLVSGKLLATTYICLFTIAVRKGRTFAPLQALGRMALTNYLTHTLIIVLPVIA LGAYGALSLTEGLFLSIAILIAQSFFSMWWLKTHRYGPFEKLWRLGTYGRQTKSS
Sequences:
>Translated_375_residues MAGPIQTNERIILYDIIRGFALCGIFLVNIPSMLGSDWMFGRPDYYGSDLFVRTLFDLFVQTKFYTIFSLLFGIGFSIFL ERSYARGESVSRYIRRILILFLFGLAHLAIWSGDILHTYAMWGLLLPLFYGLSNRAILAWAWSLLIGSFFLFYGSSALVE WANGGDFDSGAPFPTPYNMGFGIWFDYRLQIEIFAAMSNSLLVGIEILSLFLFGLYIGRERKLLTWSIQGLTRTATICVL FTLPFFGVIIWHHYGQGEAYYWVNLVAVLVSGKLLATTYICLFTIAVRKGRTFAPLQALGRMALTNYLTHTLIIVLPVIA LGAYGALSLTEGLFLSIAILIAQSFFSMWWLKTHRYGPFEKLWRLGTYGRQTKSS >Mature_374_residues AGPIQTNERIILYDIIRGFALCGIFLVNIPSMLGSDWMFGRPDYYGSDLFVRTLFDLFVQTKFYTIFSLLFGIGFSIFLE RSYARGESVSRYIRRILILFLFGLAHLAIWSGDILHTYAMWGLLLPLFYGLSNRAILAWAWSLLIGSFFLFYGSSALVEW ANGGDFDSGAPFPTPYNMGFGIWFDYRLQIEIFAAMSNSLLVGIEILSLFLFGLYIGRERKLLTWSIQGLTRTATICVLF TLPFFGVIIWHHYGQGEAYYWVNLVAVLVSGKLLATTYICLFTIAVRKGRTFAPLQALGRMALTNYLTHTLIIVLPVIAL GAYGALSLTEGLFLSIAILIAQSFFSMWWLKTHRYGPFEKLWRLGTYGRQTKSS
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788475, Length=123, Percent_Identity=36.5853658536585, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 42568; Mature: 42437
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPIQTNERIILYDIIRGFALCGIFLVNIPSMLGSDWMFGRPDYYGSDLFVRTLFDLFV CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH QTKFYTIFSLLFGIGFSIFLERSYARGESVSRYIRRILILFLFGLAHLAIWSGDILHTYA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH MWGLLLPLFYGLSNRAILAWAWSLLIGSFFLFYGSSALVEWANGGDFDSGAPFPTPYNMG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCC FGIWFDYRLQIEIFAAMSNSLLVGIEILSLFLFGLYIGRERKLLTWSIQGLTRTATICVL EEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH FTLPFFGVIIWHHYGQGEAYYWVNLVAVLVSGKLLATTYICLFTIAVRKGRTFAPLQALG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH RMALTNYLTHTLIIVLPVIALGAYGALSLTEGLFLSIAILIAQSFFSMWWLKTHRYGPFE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KLWRLGTYGRQTKSS HHHHHCCCCCCCCCC >Mature Secondary Structure AGPIQTNERIILYDIIRGFALCGIFLVNIPSMLGSDWMFGRPDYYGSDLFVRTLFDLFV CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH QTKFYTIFSLLFGIGFSIFLERSYARGESVSRYIRRILILFLFGLAHLAIWSGDILHTYA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH MWGLLLPLFYGLSNRAILAWAWSLLIGSFFLFYGSSALVEWANGGDFDSGAPFPTPYNMG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCC FGIWFDYRLQIEIFAAMSNSLLVGIEILSLFLFGLYIGRERKLLTWSIQGLTRTATICVL EEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH FTLPFFGVIIWHHYGQGEAYYWVNLVAVLVSGKLLATTYICLFTIAVRKGRTFAPLQALG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH RMALTNYLTHTLIIVLPVIALGAYGALSLTEGLFLSIAILIAQSFFSMWWLKTHRYGPFE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KLWRLGTYGRQTKSS HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]