Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is manA [H]
Identifier: 229917607
GI number: 229917607
Start: 1848532
End: 1850319
Strand: Reverse
Name: manA [H]
Synonym: EAT1b_1882
Alternate gene names: 229917607
Gene position: 1850319-1848532 (Counterclockwise)
Preceding gene: 229917617
Following gene: 229917606
Centisome position: 61.68
GC content: 45.36
Gene sequence:
>1788_bases ATGAGCGCTATTCTTTTAAAACCACACTATCAACACCGACTTTGGGGAGGGGAACGGCTGAAGCAATTTGGATTCGAATT CAATGACCCTTCAATTGGTGAAGCCTGGACGGCTTCTGCATTAGAACAAGGCAGTTCAACCGTTGTTTCCGGACGTTACG TTGGTCTTTCTTTGCGTGAACTCTATCAACAACATCCAGAGTTGTTTCAAGTTAAAGCGGACGTGTTTCCGCTACTGATT AAATGGATTGATGCAAATGATGATTTGTCTATTCAAGTTCATCCTGATGATTCGTTAGCGGAACAACTCGAAAACGAATC ATATGGAAAAAATGAATGTTGGTATATTCTCGATGCTCCAGCAAATGCTACACTCATTTACGGTCACTCCTATGCCACCT CAGAAGACTTCAACAAAGCGCTTGAAACAGGCGATTTGGAACACGGCTTGATACGAAAATCGATTCATGCCGGTGATTTT TTCTATGTCCCAGCTGGAACGGTCCATGCATTGACAAAAGGGGTATGCGTACTGGAAATTCAACAAAGTTCGGACACAAC CTATCGTCTATACGATTACGAGCGACTGGATGTGACGACCGGTCGTCCACGTGAACTTCACGTAGAAAAGGGCATTCTCG CTTCTTTCGTCCCTCACATTGGCTATAGTGAACCAATCCGTCAACTCGATCACTTTCGAACACGTTTGACGAAGAATCCA TTCTTCTTCGTGGAAAAATGGCATGTTACAGCGAAAGAAAAGATTTCGACCGACACGTTCCGGTTACTATCTGTCGTGCA AGGAACATTAATCATTGATGAGATGGAAGTACCTACGGGAGGTACACTCCTTCTCCCGGCCAATGAGTCGTTCTTGATTG AGGGAGAAGCGATTTGTCTAGTGACTGGTGTTCCTTCCGATGAAAAACAAGCTGTCCGAATCGGGATTGATTTAGGAGGG ACGAACACTCGGATTGCGGCTGTTTCACTCAAAGGTGAAGTACTGAAACAACTCACGTTTAACACGCAGCCTCAACTTCC TTTCGAAGAGACACTAAAATCTATTGAGACTGCGATTAATCAATTCAATGTTGAATTCGATATCCAGCATGTTGGAATTG TGGCTCCCGGTCCACTCGATTTGAAACAAGGGATGTTTTTAACGCCTCCAAACCTCCCGAATTGGCACAATCAAAAAATC GTTGAGCCTTTAACACAGCGCCTCGGCTTTTCTGTCACCCTTGAAAACGATGCGAATGCAGCAGCTCTCGCAGAAGCTAA ATTTGGAGCAGGAAAAGGATTCGATGCTGTTTTTTATGTAACAGTCAGCACTGGAATCGGTGGCGGTTATGTCTATAAAC ATCAAATCATTCGAGGGGCGAACGGCAGTGCCGGTGAAATCGGAAATATGATTATCCGTTCGAACGGACCAGTTCACCCT GTACTGAATCGAGGCTCTCTCGAATCACTGGCTAGTGGTACGGCACTCATGAATCGTGCAAGCGAAAAGGGATATACAAA CGTCCCTTCGCTATTATCAGATGACGAGTACCGCCATCACTTCGTCGAGGAACTGGCTAGCGGACTAGCTAACATCATTC ATACCGTCGATCCTGATGTGATTGTATTAGGAGGCGGCGTCATGATGTCGGCCTCATTATTTTGGAACGAATTACAACAA GCAGTCTCGAATAAAATGTATCCACATGCTAGTGGAAAAACGCGTCTCTGCCTCACTCAATTGTCAGGAGATGCGGGTGT GATCGGCGCTGCCTTTGTCGAAGCATAA
Upstream 100 bases:
>100_bases TTTTATTATACACATGATTAATTTCATGTCTATACTTGATTTAAACTTTGTTTAGTTTTTAAATTCATAAGTGTATATCA AATTAATAGGAGGACGGGAT
Downstream 100 bases:
>100_bases TGAGGTTTGAAAAAAAAACGGACATTCATCGTGAATATCCGTTTTTTTGTATACAGAAATGTGAAATAAATCAAAATTAT ACTTTGCGAATCATCTACAG
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MSAILLKPHYQHRLWGGERLKQFGFEFNDPSIGEAWTASALEQGSSTVVSGRYVGLSLRELYQQHPELFQVKADVFPLLI KWIDANDDLSIQVHPDDSLAEQLENESYGKNECWYILDAPANATLIYGHSYATSEDFNKALETGDLEHGLIRKSIHAGDF FYVPAGTVHALTKGVCVLEIQQSSDTTYRLYDYERLDVTTGRPRELHVEKGILASFVPHIGYSEPIRQLDHFRTRLTKNP FFFVEKWHVTAKEKISTDTFRLLSVVQGTLIIDEMEVPTGGTLLLPANESFLIEGEAICLVTGVPSDEKQAVRIGIDLGG TNTRIAAVSLKGEVLKQLTFNTQPQLPFEETLKSIETAINQFNVEFDIQHVGIVAPGPLDLKQGMFLTPPNLPNWHNQKI VEPLTQRLGFSVTLENDANAAALAEAKFGAGKGFDAVFYVTVSTGIGGGYVYKHQIIRGANGSAGEIGNMIIRSNGPVHP VLNRGSLESLASGTALMNRASEKGYTNVPSLLSDDEYRHHFVEELASGLANIIHTVDPDVIVLGGGVMMSASLFWNELQQ AVSNKMYPHASGKTRLCLTQLSGDAGVIGAAFVEA
Sequences:
>Translated_595_residues MSAILLKPHYQHRLWGGERLKQFGFEFNDPSIGEAWTASALEQGSSTVVSGRYVGLSLRELYQQHPELFQVKADVFPLLI KWIDANDDLSIQVHPDDSLAEQLENESYGKNECWYILDAPANATLIYGHSYATSEDFNKALETGDLEHGLIRKSIHAGDF FYVPAGTVHALTKGVCVLEIQQSSDTTYRLYDYERLDVTTGRPRELHVEKGILASFVPHIGYSEPIRQLDHFRTRLTKNP FFFVEKWHVTAKEKISTDTFRLLSVVQGTLIIDEMEVPTGGTLLLPANESFLIEGEAICLVTGVPSDEKQAVRIGIDLGG TNTRIAAVSLKGEVLKQLTFNTQPQLPFEETLKSIETAINQFNVEFDIQHVGIVAPGPLDLKQGMFLTPPNLPNWHNQKI VEPLTQRLGFSVTLENDANAAALAEAKFGAGKGFDAVFYVTVSTGIGGGYVYKHQIIRGANGSAGEIGNMIIRSNGPVHP VLNRGSLESLASGTALMNRASEKGYTNVPSLLSDDEYRHHFVEELASGLANIIHTVDPDVIVLGGGVMMSASLFWNELQQ AVSNKMYPHASGKTRLCLTQLSGDAGVIGAAFVEA >Mature_594_residues SAILLKPHYQHRLWGGERLKQFGFEFNDPSIGEAWTASALEQGSSTVVSGRYVGLSLRELYQQHPELFQVKADVFPLLIK WIDANDDLSIQVHPDDSLAEQLENESYGKNECWYILDAPANATLIYGHSYATSEDFNKALETGDLEHGLIRKSIHAGDFF YVPAGTVHALTKGVCVLEIQQSSDTTYRLYDYERLDVTTGRPRELHVEKGILASFVPHIGYSEPIRQLDHFRTRLTKNPF FFVEKWHVTAKEKISTDTFRLLSVVQGTLIIDEMEVPTGGTLLLPANESFLIEGEAICLVTGVPSDEKQAVRIGIDLGGT NTRIAAVSLKGEVLKQLTFNTQPQLPFEETLKSIETAINQFNVEFDIQHVGIVAPGPLDLKQGMFLTPPNLPNWHNQKIV EPLTQRLGFSVTLENDANAAALAEAKFGAGKGFDAVFYVTVSTGIGGGYVYKHQIIRGANGSAGEIGNMIIRSNGPVHPV LNRGSLESLASGTALMNRASEKGYTNVPSLLSDDEYRHHFVEELASGLANIIHTVDPDVIVLGGGVMMSASLFWNELQQA VSNKMYPHASGKTRLCLTQLSGDAGVIGAAFVEA
Specific function: Unknown
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI298566325, Length=263, Percent_Identity=31.1787072243346, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI298566315, Length=263, Percent_Identity=31.1787072243346, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI4885285, Length=263, Percent_Identity=31.1787072243346, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI190014632, Length=263, Percent_Identity=31.1787072243346, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI87081733, Length=265, Percent_Identity=30.5660377358491, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1787363, Length=258, Percent_Identity=26.7441860465116, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787878, Length=286, Percent_Identity=21.3286713286713, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786891, Length=211, Percent_Identity=28.9099526066351, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 65311; Mature: 65179
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILLKPHYQHRLWGGERLKQFGFEFNDPSIGEAWTASALEQGSSTVVSGRYVGLSLRE CCEEEECCCHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECEEECHHHHH LYQQHPELFQVKADVFPLLIKWIDANDDLSIQVHPDDSLAEQLENESYGKNECWYILDAP HHHHCCHHEEEHHHHHEEEHEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECC ANATLIYGHSYATSEDFNKALETGDLEHGLIRKSIHAGDFFYVPAGTVHALTKGVCVLEI CCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCHHHHHHCCEEEEEE QQSSDTTYRLYDYERLDVTTGRPRELHVEKGILASFVPHIGYSEPIRQLDHFRTRLTKNP ECCCCCEEEEEEEEEEEECCCCCCEEEHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCC FFFVEKWHVTAKEKISTDTFRLLSVVQGTLIIDEMEVPTGGTLLLPANESFLIEGEAICL EEEEEEEEECHHHHCCHHHHHHHHHHHCEEEEEEEECCCCCEEEEECCCCEEEECCEEEE VTGVPSDEKQAVRIGIDLGGTNTRIAAVSLKGEVLKQLTFNTQPQLPFEETLKSIETAIN EECCCCCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QFNVEFDIQHVGIVAPGPLDLKQGMFLTPPNLPNWHNQKIVEPLTQRLGFSVTLENDANA HCCEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCC AALAEAKFGAGKGFDAVFYVTVSTGIGGGYVYKHQIIRGANGSAGEIGNMIIRSNGPVHP EEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCC VLNRGSLESLASGTALMNRASEKGYTNVPSLLSDDEYRHHFVEELASGLANIIHTVDPDV CCCCCCHHHHHCCHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCE IVLGGGVMMSASLFWNELQQAVSNKMYPHASGKTRLCLTQLSGDAGVIGAAFVEA EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEHHEECC >Mature Secondary Structure SAILLKPHYQHRLWGGERLKQFGFEFNDPSIGEAWTASALEQGSSTVVSGRYVGLSLRE CEEEECCCHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECEEECHHHHH LYQQHPELFQVKADVFPLLIKWIDANDDLSIQVHPDDSLAEQLENESYGKNECWYILDAP HHHHCCHHEEEHHHHHEEEHEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECC ANATLIYGHSYATSEDFNKALETGDLEHGLIRKSIHAGDFFYVPAGTVHALTKGVCVLEI CCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCHHHHHHCCEEEEEE QQSSDTTYRLYDYERLDVTTGRPRELHVEKGILASFVPHIGYSEPIRQLDHFRTRLTKNP ECCCCCEEEEEEEEEEEECCCCCCEEEHHHCHHHHHHHCCCCHHHHHHHHHHHHHHCCCC FFFVEKWHVTAKEKISTDTFRLLSVVQGTLIIDEMEVPTGGTLLLPANESFLIEGEAICL EEEEEEEEECHHHHCCHHHHHHHHHHHCEEEEEEEECCCCCEEEEECCCCEEEECCEEEE VTGVPSDEKQAVRIGIDLGGTNTRIAAVSLKGEVLKQLTFNTQPQLPFEETLKSIETAIN EECCCCCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QFNVEFDIQHVGIVAPGPLDLKQGMFLTPPNLPNWHNQKIVEPLTQRLGFSVTLENDANA HCCEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCC AALAEAKFGAGKGFDAVFYVTVSTGIGGGYVYKHQIIRGANGSAGEIGNMIIRSNGPVHP EEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCC VLNRGSLESLASGTALMNRASEKGYTNVPSLLSDDEYRHHFVEELASGLANIIHTVDPDV CCCCCCHHHHHCCHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCE IVLGGGVMMSASLFWNELQQAVSNKMYPHASGKTRLCLTQLSGDAGVIGAAFVEA EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]