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The map label for this gene is flhO [H]

Identifier: 229917023

GI number: 229917023

Start: 1272320

End: 1273093

Strand: Reverse

Name: flhO [H]

Synonym: EAT1b_1297

Alternate gene names: 229917023

Gene position: 1273093-1272320 (Counterclockwise)

Preceding gene: 229917024

Following gene: 229917022

Centisome position: 42.44

GC content: 51.16

Gene sequence:

>774_bases
ATGCTACGCGGATTATATACAGCAGCGGGAGCGATGAATGCCCTGCAACGCCAACAAGAGATTTTGAGCAACAACCTTGG
TAACGTGAGAACACCAGGCTTCAAAGCGTCTGACGGCGTGGTCCGTTCATTCCCTGAGATGTTGCTCGCACAAGTCAGCA
ATCCGGATAACGCGAAATCGCGCGTGAAGGGAGAAGTAGGTACCCTATCAATGGGTGTCTATCTTCAAGAAACAATGCCC
CGTTTCTCAGCTGGAAGTATCACAGAATCCGGTAGCCCGACCGACCTGTATTTAAAGGCACCTACTGATTTTACGGGAGC
CCCGATGTTTGCGGTCGAACAAGGCGGCGAGACGTTGTATACGACAAATGGACGCTTCTCTATCGATGAGGCGCTCTTCC
TTCGTTCTGCGGACGGCGGATATATCCTTTCTGATGAAGGGGAACGAATCCAACTGCCATCGAGCGAGTTTCAAGTAGGG
AAAGATGGTGTCATCACATCGCTTGGACAAAACGTGGCGACTCTTGGTGCCTATCAAATCGATGACTTGACGACTCTTGA
ACAAGTCGGCAATGACTGGCGTGTGACGGGTGATGCCCCGGCGCCGGCCCAGGTCGAAGTACTACAAGGCTTTATTGAAG
AAGCGAACGTCAACCTCGACCAGACGATGGCAGACTTGATGATGACGTATCGTCAGTTTGAGGCGAATCAAAAGGTCGTC
CAAGCGTATGATAAAAGTGCCGAGCGGGCAATCGAAATCGCTCGTATTCGTTAA

Upstream 100 bases:

>100_bases
AATTTATGGGATGAACTTTTTTTGAAAAAACGGTGAATGTCACGCTCGTTTGGTACGATATAGAAAGTGAATCATGTTAT
AGGATGAAAGGAAGACGATT

Downstream 100 bases:

>100_bases
GGAGGAACACCATGCAGTCCATTTATAACTCGGTCAACTCTCTGTCTCAACTCCAGCGTCAATTAGATGTGACAGGGCAC
AATATCGCAAACGTCGATAC

Product: flagellar basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLRGLYTAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKSRVKGEVGTLSMGVYLQETMP
RFSAGSITESGSPTDLYLKAPTDFTGAPMFAVEQGGETLYTTNGRFSIDEALFLRSADGGYILSDEGERIQLPSSEFQVG
KDGVITSLGQNVATLGAYQIDDLTTLEQVGNDWRVTGDAPAPAQVEVLQGFIEEANVNLDQTMADLMMTYRQFEANQKVV
QAYDKSAERAIEIARIR

Sequences:

>Translated_257_residues
MLRGLYTAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKSRVKGEVGTLSMGVYLQETMP
RFSAGSITESGSPTDLYLKAPTDFTGAPMFAVEQGGETLYTTNGRFSIDEALFLRSADGGYILSDEGERIQLPSSEFQVG
KDGVITSLGQNVATLGAYQIDDLTTLEQVGNDWRVTGDAPAPAQVEVLQGFIEEANVNLDQTMADLMMTYRQFEANQKVV
QAYDKSAERAIEIARIR
>Mature_257_residues
MLRGLYTAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKSRVKGEVGTLSMGVYLQETMP
RFSAGSITESGSPTDLYLKAPTDFTGAPMFAVEQGGETLYTTNGRFSIDEALFLRSADGGYILSDEGERIQLPSSEFQVG
KDGVITSLGQNVATLGAYQIDDLTTLEQVGNDWRVTGDAPAPAQVEVLQGFIEEANVNLDQTMADLMMTYRQFEANQKVV
QAYDKSAERAIEIARIR

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=276, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 27894; Mature: 27894

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGLYTAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
RVKGEVGTLSMGVYLQETMPRFSAGSITESGSPTDLYLKAPTDFTGAPMFAVEQGGETLY
HHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEE
TTNGRFSIDEALFLRSADGGYILSDEGERIQLPSSEFQVGKDGVITSLGQNVATLGAYQI
ECCCCEEECCEEEEEECCCCEEECCCCCEEECCCHHHCCCCCCHHHHHCCCHHHHCCEEC
DDLTTLEQVGNDWRVTGDAPAPAQVEVLQGFIEEANVNLDQTMADLMMTYRQFEANQKVV
CCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QAYDKSAERAIEIARIR
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRGLYTAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
RVKGEVGTLSMGVYLQETMPRFSAGSITESGSPTDLYLKAPTDFTGAPMFAVEQGGETLY
HHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEE
TTNGRFSIDEALFLRSADGGYILSDEGERIQLPSSEFQVGKDGVITSLGQNVATLGAYQI
ECCCCEEECCEEEEEECCCCEEECCCCCEEECCCHHHCCCCCCHHHHHCCCHHHHCCEEC
DDLTTLEQVGNDWRVTGDAPAPAQVEVLQGFIEEANVNLDQTMADLMMTYRQFEANQKVV
CCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QAYDKSAERAIEIARIR
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]