Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is glxK [H]
Identifier: 229917021
GI number: 229917021
Start: 1270362
End: 1271465
Strand: Reverse
Name: glxK [H]
Synonym: EAT1b_1295
Alternate gene names: 229917021
Gene position: 1271465-1270362 (Counterclockwise)
Preceding gene: 229917022
Following gene: 229917019
Centisome position: 42.38
GC content: 52.63
Gene sequence:
>1104_bases ATGCGGATTGTAGTCGCGATGGATTCATTCAAAGGCTCACTTTCGAGTATGGAAGCAAATCAAGCGGTCCTTCGTGCGCT TGAAGGACATGAGGTCACCATCATACCGATCTCTGACGGAGGAGAAGGTTTTTTGGATGCTTGGATTGCGACACATTCGG AAGGGACCATTATAGAAGAAAACGTCATGTGCTTGGATGGAATACAGCGCGTTGCGCGTTTTGGTTTCGAGCCGTCAACG AGGCACGCGGTAATCGAAGTGGCGGAAACAGCAGGATTGACACTCCTCGCTCATGTCGATCCGTGGCGCTACAGTTCAGT CGGAGTCGGTCAACAGATCGTTCAAGCGCTAGATTGTGGAGCGAAGATCATCACCGTCGGGCTCGGAGGGAGCGGGACGA TGGATGGGGGAAAAGGATTGCTTGAGGCGTTGGGTGTTCGTTTTCTCGATGCGAACGGTGCTGTGTTATCGACCATCCCC CATCGACTAGAAGAAGTGGCATCAATTGATTGGTCCGGTCTTCATCCGCGTGCGCGCGAGGTCGTATGGAGAATGTCTTC CGATGTACAGAACCCATTGATTGGTGAAAGTGGAGCAGCCTATGTGTTCGGCCCCCAGAAAGGATTGGCGGCAGATGTAG TGAAGCGATATGACCGGATCCTCAATCACTACGCGAACTGTTTTGAAGTGGATAGAAGAGCACTTCCTGGAGCAGGGGCG GCTGGCGGCATCGGCTTTGCGCTATTGCAGCTTGGTGCAATCTACGTGAGTGGCATCGAAGAAGTGGTCAGTTGGTCTAA GCTCGAAGAACAGTTAGAAAAAGCAGATTGGCTGATTACAGGAGAGGGTAAATTTGACGCGCAAAGCTTTGAGGGAAAGG CACCGTATGGGTTGGCACGCCTTGCGAATACGCATGGAGTCCCGACCCTCGTCTTCACCGGACAGTCCGATTACACATCG CATATGGAGTCCGGCATCGTCGCCATTTTTCCGATTGTGTCTCGGATCATGACGTTAGAAGAAGCGATTTGGGAAGCAGC TCGGTTGCTGACGAATGCGGTCCAACGCGTGCGTCACCTCATTGAAAAGGCGCCACGACAGTAG
Upstream 100 bases:
>100_bases CGATCAGATGATGGGGCTTGTCACGGCGTTACGTCCATAATGCCTACCGCTTCTCGAGCCGAGAAGCGGTTTTTTTATAG ACAAAGGGGGAGAAGCATCA
Downstream 100 bases:
>100_bases TCGGGCGCCTTCGCATTCATAAAGAACGATCTTTTAGCAGATCACGAATCTCTGTCAACAGTTGCTCTTCTTTCGTTGGG GTCGGAATAGCAGCTTCTTC
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MRIVVAMDSFKGSLSSMEANQAVLRALEGHEVTIIPISDGGEGFLDAWIATHSEGTIIEENVMCLDGIQRVARFGFEPST RHAVIEVAETAGLTLLAHVDPWRYSSVGVGQQIVQALDCGAKIITVGLGGSGTMDGGKGLLEALGVRFLDANGAVLSTIP HRLEEVASIDWSGLHPRAREVVWRMSSDVQNPLIGESGAAYVFGPQKGLAADVVKRYDRILNHYANCFEVDRRALPGAGA AGGIGFALLQLGAIYVSGIEEVVSWSKLEEQLEKADWLITGEGKFDAQSFEGKAPYGLARLANTHGVPTLVFTGQSDYTS HMESGIVAIFPIVSRIMTLEEAIWEAARLLTNAVQRVRHLIEKAPRQ
Sequences:
>Translated_367_residues MRIVVAMDSFKGSLSSMEANQAVLRALEGHEVTIIPISDGGEGFLDAWIATHSEGTIIEENVMCLDGIQRVARFGFEPST RHAVIEVAETAGLTLLAHVDPWRYSSVGVGQQIVQALDCGAKIITVGLGGSGTMDGGKGLLEALGVRFLDANGAVLSTIP HRLEEVASIDWSGLHPRAREVVWRMSSDVQNPLIGESGAAYVFGPQKGLAADVVKRYDRILNHYANCFEVDRRALPGAGA AGGIGFALLQLGAIYVSGIEEVVSWSKLEEQLEKADWLITGEGKFDAQSFEGKAPYGLARLANTHGVPTLVFTGQSDYTS HMESGIVAIFPIVSRIMTLEEAIWEAARLLTNAVQRVRHLIEKAPRQ >Mature_367_residues MRIVVAMDSFKGSLSSMEANQAVLRALEGHEVTIIPISDGGEGFLDAWIATHSEGTIIEENVMCLDGIQRVARFGFEPST RHAVIEVAETAGLTLLAHVDPWRYSSVGVGQQIVQALDCGAKIITVGLGGSGTMDGGKGLLEALGVRFLDANGAVLSTIP HRLEEVASIDWSGLHPRAREVVWRMSSDVQNPLIGESGAAYVFGPQKGLAADVVKRYDRILNHYANCFEVDRRALPGAGA AGGIGFALLQLGAIYVSGIEEVVSWSKLEEQLEKADWLITGEGKFDAQSFEGKAPYGLARLANTHGVPTLVFTGQSDYTS HMESGIVAIFPIVSRIMTLEEAIWEAARLLTNAVQRVRHLIEKAPRQ
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=370, Percent_Identity=38.6486486486486, Blast_Score=200, Evalue=1e-52, Organism=Escherichia coli, GI1786724, Length=375, Percent_Identity=36, Blast_Score=185, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39518; Mature: 39518
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVVAMDSFKGSLSSMEANQAVLRALEGHEVTIIPISDGGEGFLDAWIATHSEGTIIEE CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEC NVMCLDGIQRVARFGFEPSTRHAVIEVAETAGLTLLAHVDPWRYSSVGVGQQIVQALDCG CHHHHHHHHHHHHCCCCCCCCHHHEEEHHHCCEEEEEECCCCCCCCCCHHHHHHHHHCCC AKIITVGLGGSGTMDGGKGLLEALGVRFLDANGAVLSTIPHRLEEVASIDWSGLHPRARE CEEEEEECCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH VVWRMSSDVQNPLIGESGAAYVFGPQKGLAADVVKRYDRILNHYANCFEVDRRALPGAGA HHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGGIGFALLQLGAIYVSGIEEVVSWSKLEEQLEKADWLITGEGKFDAQSFEGKAPYGLAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHH LANTHGVPTLVFTGQSDYTSHMESGIVAIFPIVSRIMTLEEAIWEAARLLTNAVQRVRHL HHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKAPRQ HHHCCCC >Mature Secondary Structure MRIVVAMDSFKGSLSSMEANQAVLRALEGHEVTIIPISDGGEGFLDAWIATHSEGTIIEE CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEC NVMCLDGIQRVARFGFEPSTRHAVIEVAETAGLTLLAHVDPWRYSSVGVGQQIVQALDCG CHHHHHHHHHHHHCCCCCCCCHHHEEEHHHCCEEEEEECCCCCCCCCCHHHHHHHHHCCC AKIITVGLGGSGTMDGGKGLLEALGVRFLDANGAVLSTIPHRLEEVASIDWSGLHPRARE CEEEEEECCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH VVWRMSSDVQNPLIGESGAAYVFGPQKGLAADVVKRYDRILNHYANCFEVDRRALPGAGA HHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGGIGFALLQLGAIYVSGIEEVVSWSKLEEQLEKADWLITGEGKFDAQSFEGKAPYGLAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHH LANTHGVPTLVFTGQSDYTSHMESGIVAIFPIVSRIMTLEEAIWEAARLLTNAVQRVRHL HHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKAPRQ HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132; 10086841 [H]