Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229916741
Identifier: 229916741
GI number: 229916741
Start: 959221
End: 960117
Strand: Reverse
Name: 229916741
Synonym: EAT1b_1014
Alternate gene names: NA
Gene position: 960117-959221 (Counterclockwise)
Preceding gene: 229916742
Following gene: 229916740
Centisome position: 32.01
GC content: 50.06
Gene sequence:
>897_bases ATGATGCAGATTCCACTACATTCGGACTGGCATGATACAAAGCTGACCTTGCATTTGATTTCACAGCTTCTCGGAAAAAT CAAGCTCAAACTGGCGCCGCCCGAGCCACAATGGGGGCATGTCTCGCTACCACTCACGGTCCATGGTTTCACGACAGGGC TGTTGTTTGAAGGGGAGCGGACGCTTCAGATTGATGTGGACCTGTTGACGTCTTGCCTTGTCATCCATGTCGAAGATCAA ACGGACGCCATCCCGATTGAAGCAGGGAAGACGATCAAGTCTTACTACGATGACTTATTCGATCGACTGCGGACGCACGG GGTCAACGTGCACATCAACCCGAAACCACAGGAGATGTCATTCAAAGGGTTACTCGATACGGATGAGACACCGCTCGCCT ATGACGCGACGTATGCCCGGCGAGGCTTGAGGCTGTTTCAACGGGCGGCACATGAACAACTGACGTACTTATCGAAGCTG CGGTGTCGAAAAATTAAACCGGCACTCTTTTGGGGGACGTTCGATGTGTCGTCGCTCGTCATCTATCCGATTGAGCATCC GTTTCCGGAAGACAAGGTGATTGAGCGTGTCGCCTTCGATGAACAGTTGATTGAATTCGGATTTTGGTTAGGGGACGATG TGACGGCGCGTCCAAACTATTTTGTCTTACCCTATCCGTTCCTGTTCAGACCGCTACCGACGGAAAGGCTCAAGCCGGAA GCGGCTTATTACAACGCGGAAAAGAGTGAATTTTTCTTGCCGTTACATGAACAAACGATGGGACAGGTACAAGCGTTCTT ATCCACCTCGTTTGAGATTTTGATGGATGAGATGGATTGGACGATGCGTGATCATTTCTTCATTCCATTAAAACTAGAAG AGGAGAGTGGGGAGTAA
Upstream 100 bases:
>100_bases TCATCTCCACGTATCGGGCCACGCTCTGCGGATGTGGACAGTCCGGCAAGCGACCGATTTGTGACCATAGCGGTGCGTGT AAAGGATGAGAGGATGATGA
Downstream 100 bases:
>100_bases ATGGAGATTAAACAAAAGGAAAATACGTTCTACGTTGGGGACGAGGCGAAGCCATCGGCAGAACTACACTATGTGCCGAC GGGGCCGGATAAACTGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MMQIPLHSDWHDTKLTLHLISQLLGKIKLKLAPPEPQWGHVSLPLTVHGFTTGLLFEGERTLQIDVDLLTSCLVIHVEDQ TDAIPIEAGKTIKSYYDDLFDRLRTHGVNVHINPKPQEMSFKGLLDTDETPLAYDATYARRGLRLFQRAAHEQLTYLSKL RCRKIKPALFWGTFDVSSLVIYPIEHPFPEDKVIERVAFDEQLIEFGFWLGDDVTARPNYFVLPYPFLFRPLPTERLKPE AAYYNAEKSEFFLPLHEQTMGQVQAFLSTSFEILMDEMDWTMRDHFFIPLKLEEESGE
Sequences:
>Translated_298_residues MMQIPLHSDWHDTKLTLHLISQLLGKIKLKLAPPEPQWGHVSLPLTVHGFTTGLLFEGERTLQIDVDLLTSCLVIHVEDQ TDAIPIEAGKTIKSYYDDLFDRLRTHGVNVHINPKPQEMSFKGLLDTDETPLAYDATYARRGLRLFQRAAHEQLTYLSKL RCRKIKPALFWGTFDVSSLVIYPIEHPFPEDKVIERVAFDEQLIEFGFWLGDDVTARPNYFVLPYPFLFRPLPTERLKPE AAYYNAEKSEFFLPLHEQTMGQVQAFLSTSFEILMDEMDWTMRDHFFIPLKLEEESGE >Mature_298_residues MMQIPLHSDWHDTKLTLHLISQLLGKIKLKLAPPEPQWGHVSLPLTVHGFTTGLLFEGERTLQIDVDLLTSCLVIHVEDQ TDAIPIEAGKTIKSYYDDLFDRLRTHGVNVHINPKPQEMSFKGLLDTDETPLAYDATYARRGLRLFQRAAHEQLTYLSKL RCRKIKPALFWGTFDVSSLVIYPIEHPFPEDKVIERVAFDEQLIEFGFWLGDDVTARPNYFVLPYPFLFRPLPTERLKPE AAYYNAEKSEFFLPLHEQTMGQVQAFLSTSFEILMDEMDWTMRDHFFIPLKLEEESGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34582; Mature: 34582
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQIPLHSDWHDTKLTLHLISQLLGKIKLKLAPPEPQWGHVSLPLTVHGFTTGLLFEGER CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECEEEEEEEECCE TLQIDVDLLTSCLVIHVEDQTDAIPIEAGKTIKSYYDDLFDRLRTHGVNVHINPKPQEMS EEEEEHHHHCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCE FKGLLDTDETPLAYDATYARRGLRLFQRAAHEQLTYLSKLRCRKIKPALFWGTFDVSSLV EEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEE IYPIEHPFPEDKVIERVAFDEQLIEFGFWLGDDVTARPNYFVLPYPFLFRPLPTERLKPE EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCHHHCCCC AAYYNAEKSEFFLPLHEQTMGQVQAFLSTSFEILMDEMDWTMRDHFFIPLKLEEESGE HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MMQIPLHSDWHDTKLTLHLISQLLGKIKLKLAPPEPQWGHVSLPLTVHGFTTGLLFEGER CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECEEEEEEEECCE TLQIDVDLLTSCLVIHVEDQTDAIPIEAGKTIKSYYDDLFDRLRTHGVNVHINPKPQEMS EEEEEHHHHCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCE FKGLLDTDETPLAYDATYARRGLRLFQRAAHEQLTYLSKLRCRKIKPALFWGTFDVSSLV EEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEE IYPIEHPFPEDKVIERVAFDEQLIEFGFWLGDDVTARPNYFVLPYPFLFRPLPTERLKPE EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCHHHCCCC AAYYNAEKSEFFLPLHEQTMGQVQAFLSTSFEILMDEMDWTMRDHFFIPLKLEEESGE HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA