Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

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The map label for this gene is tolC

Identifier: 229607010

GI number:

Start: 982799

End: 984115

Strand: Reverse

Name: tolC

Synonym: VCD_001919

Alternate gene names: NA

Gene position: NA

Preceding gene: 229607017

Following gene: 229607005

Centisome position: NA

GC content: NA

Gene sequence:

>1317_bases
ATGAAAAAACTGCTTCCATTATTTGTTAGTGCTGCGCTAGGCACACTAAGCTCTGCCGTTTGGGCAGAAAACCTGGCAGA
GATTTATAACCAAGCAAAAGAAAATGATCCCCAATTACTCAGCGTAGCGGCTCAACGTGATGCTGCGTTTGAAGCGGTGA
CTTCTAGCCGTAGTGCCCTTTTACCGCAAATTAATCTGACGGCGGGTTACAACATCAACCGCAGTGATCAAGCCCCACGC
GAAAGTGATCTTCTCTCTGCAGGCATCAACTTTTCACAAGAACTGTACCAACGTTCTAGCTGGGTAAGCTTAGATACGGC
TGAGAAAAAAGCCCGCCAAGCAGACTCTCAATACGCTGCCACGCAACAAGGCTTAATCTTACGTGTGGCGAAGGCTTATT
TTGAAGTGCTCCGCGCTCAAGATAACCTTGAATTCGTGCGCGCAGAAAAAGCCGCCGTGGGTCGCCAATTAGAGCAAACC
AAACAACGCTTTGAAGTCGGTTTGTCAGCGATTACCGACGTACATGATGCACAGGCACAATTCGATGGTGTATTAGCCGA
TGAAGTGTTGGCGGAAAACAGCCTCACCAATAGCTATGAAGCTCTGCGTGAAATTACGGGTCAGGAATACTCTAAGCTTG
CGGTACTCGATACCAAACGATTTGCGGCGAGTCGTACGACCGAATCAAGCGAAGCGTTGATCGAAAAAGCGCAACAGCAA
AATTTATCGCTGCTTGCTGCTCGTATCAGTCAAGATGTCGCACGTGACAACATTTCGCTTGCCAGCTCTGGCCATCTGCC
ATCACTGACCTTAGATGGTGGTTACAACTATGGCAACAATAGCAACGACAATGCGAAAAACACTTCAGGCGAAGAGTACA
ACGATTTCAAAATCGGCGTGAACCTCAAAGTACCGCTGTACACAGGTGGCAACACCACGTCACTGACCAAGCAGGCTGAA
TTTGCGTATGTAGCCGCCAGCCAAGATCTGGAAGCCGCTTACCGCTCAGTGGTTAAAGATGTGCGTGCATACAACAACAA
CATCAACGCTTCAATTGGTGCACTGCGTGCTTATGAGCAGGCAGTGATTTCTGCGAAGTCAGCACTGGAAGCGACCGAAG
CAGGTTTTGATGTCGGTACGCGTACCATTGTCGATGTACTCGATGCCACACGTCGCCTGTATGATGCGAACAAAAATCTC
TCGAATGCTCGCTATGACTACATTCTCAGTGTGCTGCAATTGCGCCAAGCGATTGGTACTCTGAGTGAGCAAGACGTGAT
GGATGTCAACGCAGGCCTAAAAGTCGCGAAGAAGTAA

Upstream 100 bases:

>100_bases
GTTAAGTGTAAAAAAGTGCAAAGTTTCGAGTGAATTACCATCAATTTGAGTTAAACTCTTGAGGAATAAATCCTTTCACA
TCACGTCAGGAATAGGACCG

Downstream 100 bases:

>100_bases
TCCATCTCTTTTGAGCTGCATGAAATAAATGAAGGGGCCATTTGGCCCCTTTTGCTATATATCGATTAAGTAATTGATAA
GTATCACATTACTTATCAAT

Product: outer membrane channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>438_residues
MKKLLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYNINRSDQAPR
ESDLLSAGINFSQELYQRSSWVSLDTAEKKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQT
KQRFEVGLSAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQ
NLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVNLKVPLYTGGNTTSLTKQAE
FAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNL
SNARYDYILSVLQLRQAIGTLSEQDVMDVNAGLKVAKK

Sequences:
NA

Specific function: NA

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA