Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 229606709

GI number:

Start: 668204

End: 670753

Strand: Reverse

Name: Not Available

Synonym: VCD_001618

Alternate gene names: NA

Gene position: NA

Preceding gene: 229606710

Following gene: 229606708

Centisome position: NA

GC content: NA

Gene sequence:

>2550_bases
GTGAGATTAGAGAAGGGTATGCCTTTAAAACGCCAAATTCGCTTAAAAACCGCCATCATACTGCCGTTTGTCTTGACCTT
TCTGTTCATGATTTTGGCAATGGCGGCGGTGCAAACCTATCGTTATGAGCAAACGGTAAAAGAGCTCAGCTCTAAGAAGT
TATCTTATCTGACTGATAGCATCTCACAACGCTTGTCGGACTTTCTTAATCGCCCTTTTTTTGCCAATCAGATGATTGCC
TACAACGTGGGCTTTCACCATCTTTATCAGCTCAATGACGTAAGTCGAATTGAAGACTTCATTCGTGCGGCAGCCAATCC
CATAGGTAACAATATCCAGCAAATCGACGTGGTCGGTTTTGGTGGAGTGAATGGTGAATATGTAGGACTGCGTCGAGATG
CACCAGAGCAATACAGCCTAATGCTCAAAGATGCACGCACTGACGATAAACTAGTTATTTATCAAACTGCGACAAAGAAT
GATCAATTGCGTACGGTGATTGATAACTACGATCCTCGCGTGCGGCCTTGGTTTGCCCCCGTCGCGCAGAAGCCATCGCC
ACAATGGTCTTCGGTTTATACCAATATGGATGAGAAGCAAGAGATCACTCTCTCCGCACTCAGCCCGGTTTTTCAGGATA
AAAGATTTATTGGCGTCATGGTTTCTGATGTCAAACTCAATACGTTCAACCAGTTTCTCTCCGAACTCAAACAACGTATG
AATGCTGACGTTTATGTGATGGACAAACAGCACCGCCTGATTGCCCATTCCGGTGAGGGTAGCGTGGTTTCTTGGGGGAC
ACCGTTAAGCCCGAAAGGTGAAAGGCTGTTCGCCAGCGAGAATCGTAACCCCATCATTCGTAGCAGCGCCGAACAACTTG
ATCTGCAAGGCCTAAATGTGGGTACTTTTACTACCTACGTCAATCAACAGCGCTATTTCAATCAAGCCTCAGCCTTTACC
GATCAATATGGCCTCACTTGGTATATCAGTGTTTCCATCGCGGAAGGGGATCTCCTAGGCAGCTTACCTGAAAATCAAAA
AACCAGTTGGGCGATAGGATTATTAGTGAGCTTAGTGGGTTTAGGGCTCGGCTTAATGGCATTAAACCGCGTCGCCAACC
CGATCATTTCTACCGCCTCGGCAGCAAGACAACTTGCCAATGGTGACTGGACAGCCAGCATGCCTAAGCCCGGTAAAATC
TATGAGACCAGTTTGCTTGTCCAAGCCTTTATTGAGATGACCAATAGCCTCAAAGCCTCATTCAAAGCGCTACGCTCACA
GTTGGTCTACGATTCTCTGACCCAACTTCTTAGCCGAGAGGGGTTAGTTGAGCATTGTCATCAAATCCCGCAACTCAACG
GGGGCCTTATCCTGATTGGGATTGATAAATTTCGCGATATTAACGACAGCTTAGGTCACCATCAGGCCGATCAACTGCTG
GTTGCTATTGCTCAAAGACTGAAAGTAACGTTTCCCGAGCCCGCTCTGATTGCTCGGATTGGTGGCGATGAATTTGCTAT
CTACCTACCCGATGTGAATCAGCAAGATGATTTAAAAAGTGTGGCTACCGATATTCTCAAGCTGTTTGCCTCTCCATTTA
GCATGCCAAGCGACAATATTGCTGTGAATGTGTCGATCGGAATTGTGTACCTTGAAGAACCGAATATGACCGTTTGGCTG
CGTAATGGTAGCATCGCCCTCAGTAACGCAAAGGCAGAACATACGCATATCAGTTTTTACTCACCAGAGATGGCGAATGC
TTCACGCAAAAGAATGCTCATGGTCACGCAGATAAAACTGGCGCTCGATAATCAAGAGTTCGTTCCCTTCTATCAGCCGA
TAGTCGATTTAAATAGTGGTGAAGTATTAGGCGCAGAAGCGCTTGCTCGTTGGATTTCCCCTGAATTCGGCTTGATCCCA
CCAATGGATTTTATTCCGATTGCAGAAGAGAGCGGATTGATCAATGCGATTGGCGAGCAGATCTTACGTCAAGCCTGTGC
TGATACCGTTCGTGGTATTGCAGAAAATAAATGGCCATCGACGTTCCATATGCATGTCAATCTATCGGTTAATCAACTCT
CTCATCCCGATTTTATCGCTCAGTTACACAGCGTATTAGACGAATCCGGCCTACAGCCTACCAACCTGACACTCGAAATC
ACCGAATCACGCATTGTCGATAATGACCCCGTTATCTTGCACAATATGCTTGAGTTGAAAAAAGCAAGAATACACATTGC
AATCGATGATTTTGGTACAGGCTATAGTTCTCTCGCCTACTTACACAAACTTCCCTTCGATTGCCTAAAAATTGATAGAG
AATTTGTCTCTCAACTCAATGCATACAATATTGAAAACAGCGTGGTAGCCGCGATCGTTAACATGACTCGCGGTTTTAAA
GTCGAGCTGGTCGCTGAAGGCATAGAGACTCAAGAGCAGGTGGATTTACTGAATCAACTCGGTTGCCCACGCGGGCAAGG
CTTCTTATTCAGTAAACCAATGGCTTATCAGGATTGGCCAACAGATCTGGTTAACATGAAGCAAAGTTAA

Upstream 100 bases:

>100_bases
GCCAAAGTATTGGGCTGGGGACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAAGTGTCAGCTTAACGGCCTAC
CCAACTTTATTGCACAGGAA

Downstream 100 bases:

>100_bases
ACAAAATAAGTCCTTTTCTTTCTTTTGCTTAGCTGACAGCCCGTGGATTGGTTTTTATACTTAACGGCAAATACTGATAA
GGACAACAATAATGATAACT

Product: GGDEF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>849_residues
MRLEKGMPLKRQIRLKTAIILPFVLTFLFMILAMAAVQTYRYEQTVKELSSKKLSYLTDSISQRLSDFLNRPFFANQMIA
YNVGFHHLYQLNDVSRIEDFIRAAANPIGNNIQQIDVVGFGGVNGEYVGLRRDAPEQYSLMLKDARTDDKLVIYQTATKN
DQLRTVIDNYDPRVRPWFAPVAQKPSPQWSSVYTNMDEKQEITLSALSPVFQDKRFIGVMVSDVKLNTFNQFLSELKQRM
NADVYVMDKQHRLIAHSGEGSVVSWGTPLSPKGERLFASENRNPIIRSSAEQLDLQGLNVGTFTTYVNQQRYFNQASAFT
DQYGLTWYISVSIAEGDLLGSLPENQKTSWAIGLLVSLVGLGLGLMALNRVANPIISTASAARQLANGDWTASMPKPGKI
YETSLLVQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHCHQIPQLNGGLILIGIDKFRDINDSLGHHQADQLL
VAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMTVWL
RNGSIALSNAKAEHTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIP
PMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEI
TESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFK
VELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPMAYQDWPTDLVNMKQS

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA