| Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
|---|---|
| Accession | NC_012660 |
| Length | 6,722,539 |
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Identifier: 229590109
GI number:
Start: 2914541
End: 2915956
Strand: Reverse
Name: Not Available
Synonym: PFLU2642
Alternate gene names: NA
Gene position: NA
Preceding gene: 229590110
Following gene: 229590108
Centisome position: NA
GC content: NA
Gene sequence:
>1416_bases ATGTCGTCATCTATTCGTAAATCCAACCATTCAGACGCATTGACCCGCCTGGCTCAAGCTGTGGCGGTGGCTGTGTCCGC CACGCTGGCGGGCTGCCAATCAAGCAGTTTCACCGCACAATCCACCGTGCATCCCAAGCCGAACCTTAGCGCCAAGATCA AACAGAAACCCGTCATTTGGCTGTCAGAGAAGCCTGCACCCGAAGTGCCCCAGGACGTCTGGGAACGCATGCGACGGGGC TTTCAATTGCAGGAAGGCCTAGGCGTCAACCCGCGCATCGAGCAACAGCGCCTGTGGTTCGCCAGCAACCCTTCCTTCCT GGAGAACGCCGGAGAACGCGGCAGCCTCTACATTCACTACATCGTCGAACGCCTTGAAGAACGCAACATGCCCCTGGAGC TGGCGCTGCTGCCGGTGATTGAAAGTGCCTACAACCCGATGGCCTATTCGCGCAGCGATGCGGTCGGCCTGTGGCAGTTC ATCCCCTCCACCGGGCGCTACTTCAACCTGCGCCAGACCCGCGCCTACGACGGCCGCCGCGACATCACCGCCTCCACCAC CGCCGCCCTCGACTACCTGACCCGCCTGCACGACATGTTCAACGGCGACTGGCTGTTGGCCCTGGCCGCCTACAACGCCG GCGAAGGCACGGTGAGCCGGGCAATCGAGCGCAACGAGAAGCTCGGCCTGCCGACCGACTACTGGAACCTGCCCCTGCCC CAGGAAACCAAGGACTACGTGCCCAAGTTCCTGGCACTGTCCCAGGTGGTGCTGGCGCCCGAGGCCTATGGCGTCAACCT GAACCCGATCGCCAACACGCCGTACTTCGAAGTGGTTGAAGTCAAGCAGAGCATGGACCTGTCACGGGTTGCCGCGCTGG CCGAGATCGACGAAGACGAACTGTTCCAGCTCAACCCTGCCCTGAAACAACGCACCACCCTGGACGGTCCCCAGCATTTG CTGGTGCCCAGCTCCAAGGCGCAACTGCTCACCAGCACCCTGTCGACGATGAAGCCGGAAGAATTACTGGCGATGCGTCC GAAAAAGCAGGTGTTCGACGAAGTCGAGACCGCCCGGGTGGCCGGCCGCAGCCGCAGCTACAAAGTGCGCAGTGGCGACA ACCTCACGCTGATCGCCAAGGCCAACAAAGTCGACGTGCATGACCTGCAACGCTGGAACAAGCTCAACGGCCAGGCCCTC AAGGTCGGCCAGACCCTGGTGATGCAGGACACGCGCAAGCTGGTGGCCAAGGCCGACAGCAAGAAGCCAGTGCAGTACAA AGTCAAGAAAGGCGACTCGCTGTACATCGTCGCCAAGCGCTTCAACGTTGAGATGCAACATCTCAAGCGCTGGAACCCGC GCACAGGCCAGGCGCTTAAGCCAGGGCAGATGCTGGTGGTTTCCGGGCCACGCTAA
Upstream 100 bases:
>100_bases AACCAGAAGCAATCTGATACGTAATTTCTGAATGGTTGACCGGAACCGAACGGGTTTCTAGAATCGCCCGACATTTTTGC CCGGAACTTACTTCCAGCCA
Downstream 100 bases:
>100_bases CTGACAAACCAGCCTGTTTGTGTGAACAGGCTTGTATGGTGAACAGGCTTGCTGTGTTGAGCGGGCTTGTTGTGGTGAGC GGGCTTGCCCCGCGCTGGGC
Product: 3 membrane-bound lytic murein transglycosylase D
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>471_residues MSSSIRKSNHSDALTRLAQAVAVAVSATLAGCQSSSFTAQSTVHPKPNLSAKIKQKPVIWLSEKPAPEVPQDVWERMRRG FQLQEGLGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRSDAVGLWQF IPSTGRYFNLRQTRAYDGRRDITASTTAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLP QETKDYVPKFLALSQVVLAPEAYGVNLNPIANTPYFEVVEVKQSMDLSRVAALAEIDEDELFQLNPALKQRTTLDGPQHL LVPSSKAQLLTSTLSTMKPEELLAMRPKKQVFDEVETARVAGRSRSYKVRSGDNLTLIAKANKVDVHDLQRWNKLNGQAL KVGQTLVMQDTRKLVAKADSKKPVQYKVKKGDSLYIVAKRFNVEMQHLKRWNPRTGQALKPGQMLVVSGPR
Sequences:
NA
Specific function: NA
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA