Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
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Accession | NC_012660 |
Length | 6,722,539 |
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The map label for this gene is hmgA
Identifier: 229588566
GI number:
Start: 1134994
End: 1136277
Strand: Direct
Name: hmgA
Synonym: PFLU1025
Alternate gene names: NA
Gene position: NA
Preceding gene: 229588564
Following gene: 229588567
Centisome position: NA
GC content: NA
Gene sequence:
>1284_bases ATGAACCTCGAATACCTGTCGGGCTTCGGCAATGAGTTCGCCAGCGAAGCCCTGGTCGGCGCACTGCCAGTCGGCCAGAA CTCCCCACAAAAAGCGCCCTATGGGCTGTACACCGAACTGTTCTCCGGCACGGCGTTCACCATGGCGCGCAGTGAAGCCC GGCGCACCTGGCTGTACCGCATTCAGCCGTCGGCCAATCACCCAGCGTTTATCAAGCTTGAACGGCAGTTGGTCGGTGGG CCGTTGGGGGCGGTGACGCCGAATCGCTTGCGCTGGAACCCGTTGGATATTCCAAGTGAGCCGACTGACTTTGTCGATGG GCTTGTAGGGATGGTCGCTAATTCCGGGTCGGAAAAACCCTCGGGCATCAGCATCTACAACTACCGCGCCAATCGTTCGA TGGAGCGGGTGTTCTTCAATGCCGATGGCGAATGGTTGATCGTTCCCGAACAGGGCCGTCTGCGTATCGCGACTGAATTG GGCGTGCTGGAAGTCGAGCCGCTGGAAATCATCGTGCTGCCGCGCGGCCTCAAATTCCGCGTCGAACTGCTGGATGCGCA AGCGCGCGGCTACGTCGCCGAGAACCACGGTGCCCCACTGCGCCTGCCGGACCTGGGGCCCATCGGCAGCAACGGCCTGG CCAACCCGCGCGACTTCCTGACCCCGGTCGCCCACTACGAAGACCTGAAACAACCGACAACGCTGGTACAGAAGTTCCTC GGCGAACTTTGGGCCTGCGAGCTGGATCATTCCCCGCTCAATGTGGTCGCCTGGCACGGCAACAACGTGCCCTACAAATA CGACCTGCGCCGCTTCAACACGATAGGCACCGTGAGCTTCGACCACCCGGACCCGTCGATCTTCACGGTATTGACCTCGC CCACCAGCACCCACGGCCTGGCCAACCTCGACTTCGTGATCTTTCCGCCGCGCTGGATGGTGGCCGAGAACACCTTCCGT CCGCCGTGGTTCCATCGCAACCTGATGAACGAGTACATGGGCCTGATCCAAGGTGCCTACGACGCCAAGGCCGAAGGCTT CGTGCCCGGCGGCGCGTCGCTGCACAGCTGCATGAGCGCCCACGGCCCGGACGGCGAAACCTGCACCAAGGCCATCAACG TGGCGCTGGCGCCGCACAAGATCGATAACACCATGGCCTTTATGTTCGAGACCAGCCAAGTGCTGCGCCCGACCCAGTTC GCCTTGGACTGCCCGCAACTGCAAAACACTTATGACGCGTGCTGGGCCTCGTTGCCCGCCACCTTCAACCCGAACCGGAG ATAA
Upstream 100 bases:
>100_bases GATGAATGGGCGTCTTTATAGCTTGACGGTCGTTAGTGATCAAATTACGTTATGCGTAACTGGATTACGATAAAAACAAC TTCCGTACAGAGGATGATCC
Downstream 100 bases:
>100_bases ACCCATGACGCAGCCAACACTCACCCGCAGCTGGGTGGCCTCCGCGAATGGTCACACCGATTTTCCGCTGCAGAACCTGC CGTTGGGCGTGTTCAGCGTC
Product: homogentisate 1,2-dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>427_residues MNLEYLSGFGNEFASEALVGALPVGQNSPQKAPYGLYTELFSGTAFTMARSEARRTWLYRIQPSANHPAFIKLERQLVGG PLGAVTPNRLRWNPLDIPSEPTDFVDGLVGMVANSGSEKPSGISIYNYRANRSMERVFFNADGEWLIVPEQGRLRIATEL GVLEVEPLEIIVLPRGLKFRVELLDAQARGYVAENHGAPLRLPDLGPIGSNGLANPRDFLTPVAHYEDLKQPTTLVQKFL GELWACELDHSPLNVVAWHGNNVPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSTHGLANLDFVIFPPRWMVAENTFR PPWFHRNLMNEYMGLIQGAYDAKAEGFVPGGASLHSCMSAHGPDGETCTKAINVALAPHKIDNTMAFMFETSQVLRPTQF ALDCPQLQNTYDACWASLPATFNPNRR
Sequences:
NA
Specific function: NA
COG id: COG3508
COG function: function code Q; Homogentisate 1,2-dioxygenase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA