| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yjjB [C]
Identifier: 229013122
GI number: 229013122
Start: 4099654
End: 4100115
Strand: Reverse
Name: yjjB [C]
Synonym: y3689
Alternate gene names: 229013122
Gene position: 4100115-4099654 (Counterclockwise)
Preceding gene: 22127564
Following gene: 22127562
Centisome position: 89.12
GC content: 46.75
Gene sequence:
>462_bases GTGGGCGTGAGTTTACTGTGGGCATTACTACAGGACATGGTGTTAGCTGCGATCCCGGCGTTGGGCTTTGCCATGGTATT CAATGTACCGGTTCGTGCACTGCGTTATTGCGCACTATTGGGGGCAATCGGTCATGGCTCACGTATGTTGATGATCCATT TTGGTATGAATATCGAACTGGCTTCACTCGTGGCTTCAATTATGATTGGGATCAATTGGTCACGTTGGCTGCTTGCACAC CCTAAAGTTTTTACTGTTGCGGCTGTCATTCCCATGTTCCCTGGGATTTCCGCTTATACCGCCATGATATCGGTGGTTGA GATTTCTCATCTGGGTTATAGCGAAGCATTAATGTCTACAATGGTGACGAACTTCTTGAAAGCCTCATTTATCGTCGGGG CGTTGTCGATTGGTTTATCATTGCCAGGATTATGGTTATATCGTAAACGCCCTGGTGTATAA
Upstream 100 bases:
>100_bases ATGTTAATACGGGGTTGGCGCGTTGGGCGATGGCCAGCTTGCTGACCTTATCCACCTGTATTGGGGTGGTATTCGCGATG GCACTTTGGGGTTTGCGGGG
Downstream 100 bases:
>100_bases GGCTTTTTTTTAAATCGGCCACGACACTAGGCTAGGAGCAGTCCTATATGTATCATTCGCTTACTGATCGCTATCGACGC TTGATTAGGCTTTACGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MGVSLLWALLQDMVLAAIPALGFAMVFNVPVRALRYCALLGAIGHGSRMLMIHFGMNIELASLVASIMIGINWSRWLLAH PKVFTVAAVIPMFPGISAYTAMISVVEISHLGYSEALMSTMVTNFLKASFIVGALSIGLSLPGLWLYRKRPGV
Sequences:
>Translated_153_residues MGVSLLWALLQDMVLAAIPALGFAMVFNVPVRALRYCALLGAIGHGSRMLMIHFGMNIELASLVASIMIGINWSRWLLAH PKVFTVAAVIPMFPGISAYTAMISVVEISHLGYSEALMSTMVTNFLKASFIVGALSIGLSLPGLWLYRKRPGV >Mature_152_residues GVSLLWALLQDMVLAAIPALGFAMVFNVPVRALRYCALLGAIGHGSRMLMIHFGMNIELASLVASIMIGINWSRWLLAHP KVFTVAAVIPMFPGISAYTAMISVVEISHLGYSEALMSTMVTNFLKASFIVGALSIGLSLPGLWLYRKRPGV
Specific function: Unknown
COG id: COG3610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0442 family [H]
Homologues:
Organism=Escherichia coli, GI145693219, Length=154, Percent_Identity=75.3246753246753, Blast_Score=229, Evalue=4e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020914 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16535; Mature: 16404
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSLLWALLQDMVLAAIPALGFAMVFNVPVRALRYCALLGAIGHGSRMLMIHFGMNIEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH ASLVASIMIGINWSRWLLAHPKVFTVAAVIPMFPGISAYTAMISVVEISHLGYSEALMST HHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH MVTNFLKASFIVGALSIGLSLPGLWLYRKRPGV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC >Mature Secondary Structure GVSLLWALLQDMVLAAIPALGFAMVFNVPVRALRYCALLGAIGHGSRMLMIHFGMNIEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH ASLVASIMIGINWSRWLLAHPKVFTVAAVIPMFPGISAYTAMISVVEISHLGYSEALMST HHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH MVTNFLKASFIVGALSIGLSLPGLWLYRKRPGV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA