| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827005
Identifier: 227827005
GI number: 227827005
Start: 615325
End: 616425
Strand: Direct
Name: 227827005
Synonym: M1425_0663
Alternate gene names: NA
Gene position: 615325-616425 (Clockwise)
Preceding gene: 227827004
Following gene: 227827008
Centisome position: 23.59
GC content: 47.32
Gene sequence:
>1101_bases GTGAACCCCGAGAAAGAGCTGGACATTGCGAGGAGCGAGTTCATTAAGTCCTTCAACTACCTGATTGGAACACTGAGGAT GAACGGATTGAGCAGAAAGGTCGCAGTAGGCTTAGCACTCATGACCTTGATAGGAGGAAGGGCCAGCATTAGAAACGCAT CCATCACGTTCAAGCTAAACTACGCCAACTTGTTAAAAACACTGGAGAACCTAGAGAACACATGGAGTGACTACCTCGAG GCGTTAAGCAAAGTGATAGTTGGACCGGTAGTAGTGATAATTGACGACACCTTCGACCACAAACTCTATTCCAGAGTAGA GGGCATAGCAAGCAAGTACGGGAACTACTTAGCGTGGTGCTCCACGCACAAGAGATTCGAGCCCGGCATACAAGTCCTCA CAATAGCCTTATACGACTTAGCCATGGGAAAGAGCTATCTGATAGGAGCTTTCCCATACGCCACGAGAAAGATGTGGGAA AGCGGGATGGTAAGCGAGTTCAAGACCAAGATCGAGATGGCTGCGGAAATTATCGAGGTTCTCAAAGAGCGATTCCATGT GGCGAGGGTAGTGTTTGACTCCTGGTATTGGTCGGAGAAGCTGGTGAAGGGTAGTGTAGTTTCTGAGTTGAAGTCTAATA GGAGGCTTCTAAGGGTTAGGCCTTTGGAGGGAGAGAAGACGTTGGGGGTGGAGGGGCACCCCCATGTCGGAGATCTCCCT CCAGGGTCTTACTTAGCTGAGTTGACCCTAGGAGACCAAGTTATTACTATAAAGTTGTTAATACTGGTATATAAAGATAA CAGGCTCAACTTGTACTCCACTGACCTTAACTTGAGCGATGAGGAGATAGAGGTAACTTGGAAGATTAGGTGGGAGATAG AGAAGTTACACAAGGATATTAAGGCTCTGGGTATGCAAGATTCCTCTTTCCTCAAGAGGAAGAGGCTTCAAGGTTATCTG CTCCTCTTCGTGATGGCGGTTAACACGGTCAGAGATTTGATCAGCTCCCTTAACTTGAAGAGCGTGGAGGAACTTCTCCG GTTCGTTGAAATACGTTTAGGAGGTGCTCTGGGTTTGATGAAAATCTTTAAGCTGCGTTAA
Upstream 100 bases:
>100_bases ACTTTAAATATATAGCAGTTGTTCTACTTTTCCTCGGTAATACAAAGTTCACGGTACTATCGATAAAGTTTTTAGATTTA CGTTTAGTTGATTAAAAACT
Downstream 100 bases:
>100_bases AGTAGAACAACTGCTAAATATATTAAAGGAGCTTGAGTATTCAGAAAATGAAATAGAAGATATGATTAAGGAAAATATAA TTATGCCAAATAGAGGAGAA
Product: transposase, ISC1217
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLNYANLLKTLENLENTWSDYLE ALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWCSTHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWE SGMVSEFKTKIEMAAEIIEVLKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDIKALGMQDSSFLKRKRLQGYL LLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLMKIFKLR
Sequences:
>Translated_366_residues MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLNYANLLKTLENLENTWSDYLE ALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWCSTHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWE SGMVSEFKTKIEMAAEIIEVLKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDIKALGMQDSSFLKRKRLQGYL LLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLMKIFKLR >Mature_366_residues MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLNYANLLKTLENLENTWSDYLE ALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWCSTHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWE SGMVSEFKTKIEMAAEIIEVLKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDIKALGMQDSSFLKRKRLQGYL LLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLMKIFKLR
Specific function: Unknown
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41755; Mature: 41755
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCEEEEEEC YANLLKTLENLENTWSDYLEALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEE STHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWESGMVSEFKTKIEMAAEIIEV CCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH LKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDI CCCCEEEEECCCCCEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEEHHHHHHHH KALGMQDSSFLKRKRLQGYLLLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH KIFKLR HHHHCC >Mature Secondary Structure MNPEKELDIARSEFIKSFNYLIGTLRMNGLSRKVAVGLALMTLIGGRASIRNASITFKLN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCEEEEEEC YANLLKTLENLENTWSDYLEALSKVIVGPVVVIIDDTFDHKLYSRVEGIASKYGNYLAWC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEE STHKRFEPGIQVLTIALYDLAMGKSYLIGAFPYATRKMWESGMVSEFKTKIEMAAEIIEV CCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH LKERFHVARVVFDSWYWSEKLVKGSVVSELKSNRRLLRVRPLEGEKTLGVEGHPHVGDLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC PGSYLAELTLGDQVITIKLLILVYKDNRLNLYSTDLNLSDEEIEVTWKIRWEIEKLHKDI CCCCEEEEECCCCCEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEEHHHHHHHH KALGMQDSSFLKRKRLQGYLLLFVMAVNTVRDLISSLNLKSVEELLRFVEIRLGGALGLM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH KIFKLR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA