Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 227815674

GI number: 227815674

Start: 2817607

End: 2818221

Strand: Reverse

Name: yebA [C]

Synonym: BAMEG_3094

Alternate gene names: 227815674

Gene position: 2818221-2817607 (Counterclockwise)

Preceding gene: 227815675

Following gene: 227815672

Centisome position: 53.88

GC content: 35.45

Gene sequence:

>615_bases
ATGAAAGTTTTAAAATGCGGTGTCATGTTATTGAGTATACTGTTTGTATCTCAATTACATGTTTATGCAGAAGAAAATCG
ATGGACATGGCCTGTTGAAGGTCAGATAAGTGATTATTTTGGGACAAGGCATGGAAAACACTATGGTATTGATGTAGCTG
CGCCGATTGGAACGCCTGTGGTAGCTATCCAAGATGGTAAGGTAACGAGGTCTTATTATTCAAGTAGTTATGGAAATGTT
GTATTTATTAAACACGGAGAATATGAGGCTGTATATGCACATTTAAATAAGAGATATGTGAATCAAGGAGATTATATTTC
CAAAGGAGAAAAAATTGGAGAAGTAGGGAACACGGGAGAATCGCGAGGTGCGCACTTACATCTAGAACTTCATCAAGGAA
GATGGACGATGGCGAAAAAGAATGCGATGAACCCATTGCTTGTTTTAAGTGAACAAAGAAATGAAGTTGTTTCTTCGTCA
TTATATGTCGTACAAAAAGGAGATACTTTAGTTAGTATTGCACGGAAATTTAGTATGACACTTAAGGAAATTAAAGAAAA
AAATGGATTGCAGCAAGAGCTAATTTATCCTAATCAACAATTATATGTTAAGTAA

Upstream 100 bases:

>100_bases
GAAGGAAGTGGAGTAATTCACTTTCTTTTTTTGTATACTTTTTTCTGTAATATACCAAAATAGAGAAGGTATGGTGGTAA
TTAGAAAACGGAGGATGTAT

Downstream 100 bases:

>100_bases
AGGAAACGCCTCAAAAATTAAACTTTGAACAAATTTATGTTCTTCTTAAATAAGATTCAATGTAAATGAAATTATATGGG
CGCTTTTGCTAGAACTATTG

Product: peptidase, M23/M37 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPVVAIQDGKVTRSYYSSSYGNV
VFIKHGEYEAVYAHLNKRYVNQGDYISKGEKIGEVGNTGESRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSS
LYVVQKGDTLVSIARKFSMTLKEIKEKNGLQQELIYPNQQLYVK

Sequences:

>Translated_204_residues
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPVVAIQDGKVTRSYYSSSYGNV
VFIKHGEYEAVYAHLNKRYVNQGDYISKGEKIGEVGNTGESRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSS
LYVVQKGDTLVSIARKFSMTLKEIKEKNGLQQELIYPNQQLYVK
>Mature_204_residues
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPVVAIQDGKVTRSYYSSSYGNV
VFIKHGEYEAVYAHLNKRYVNQGDYISKGEKIGEVGNTGESRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSS
LYVVQKGDTLVSIARKFSMTLKEIKEKNGLQQELIYPNQQLYVK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=121, Percent_Identity=38.8429752066116, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI87082174, Length=129, Percent_Identity=34.8837209302326, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789099, Length=127, Percent_Identity=33.8582677165354, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 23079; Mature: 23079

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPV
CCHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCHHHHHCCCCCCEECEEEECCCCCCE
VAIQDGKVTRSYYSSSYGNVVFIKHGEYEAVYAHLNKRYVNQGDYISKGEKIGEVGNTGE
EEEECCCEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCC
SRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSSLYVVQKGDTLVSIARKFSMT
CCCCEEEEEEECCEEEEHHHCCCCEEEEEECHHHHHHHCEEEEEECCCHHHHHHHHHHHH
LKEIKEKNGLQQELIYPNQQLYVK
HHHHHHHCCCHHHHCCCCCEEEEC
>Mature Secondary Structure
MKVLKCGVMLLSILFVSQLHVYAEENRWTWPVEGQISDYFGTRHGKHYGIDVAAPIGTPV
CCHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCHHHHHCCCCCCEECEEEECCCCCCE
VAIQDGKVTRSYYSSSYGNVVFIKHGEYEAVYAHLNKRYVNQGDYISKGEKIGEVGNTGE
EEEECCCEEHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCC
SRGAHLHLELHQGRWTMAKKNAMNPLLVLSEQRNEVVSSSLYVVQKGDTLVSIARKFSMT
CCCCEEEEEEECCEEEEHHHCCCCEEEEEECHHHHHHHCEEEEEECCCHHHHHHHHHHHH
LKEIKEKNGLQQELIYPNQQLYVK
HHHHHHHCCCHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]