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The map label for this gene is ypbB [H]

Identifier: 227815670

GI number: 227815670

Start: 2813898

End: 2814959

Strand: Reverse

Name: ypbB [H]

Synonym: BAMEG_3089

Alternate gene names: 227815670

Gene position: 2814959-2813898 (Counterclockwise)

Preceding gene: 227815672

Following gene: 227815669

Centisome position: 53.82

GC content: 31.83

Gene sequence:

>1062_bases
ATGCAAATACAATATACTTTGTTGCATTGTTTAAAACAATTGAATGGTGAAAGAACCGTTTCTTCTATTTATTATTTACT
AAAGGGCAAACGTTCTTCGCAAACTTTACAAGATGGAAATATGTTCCGAATTTCTTTTTTGTTCGGAATATATAAATCAT
TAAATAGAAATGACTATGATGGTGAAGTTGCAAAGTTGTTGCAAGCGGATTTTATTCAAGAAATACATGAAAATACATAT
GTGTTAACACCTACGGGTAAAATGCAGTTACATAAATGGGAGGAAGTTTATGCTTTTCCGGCGCATTTGCATGGTTTACA
TTATGGTGAATTAGGTGAAACATTTTGGAAAAGATTATCATTAATTATTCAAATCATATCAAATTTACAACAGAATAATA
CGAGGTTTATTCCAATTCAGCAAGATACAGAAATAATGATGTGGGTGAAACGTTTTCTAACAGGAAGGCCATATAAGAGA
AGTGAGTTGGCGAGAAAACTATGGACGGAAGTACATAATCTTTTAGAAAAGAGTAATGCGATAGAAGCGACGATTGTAAC
ATATCGATTAACAGGTTATGAACGCATTGGTTGTACATTGCAACAATTAGCAGAAATTACGAAACAAGATATATTCAGGG
TGTATTTTTTATTTTGGGGTACAATACATTTCTTTATACAAGAAGTTCGTGATAAAGAAAATGAATTTCCACTATTAGCT
GAAATTATATCTTATCCAAATGAGAGAGCTGAATTATTTAGTTTATCCACGAAAAAAACATATAATTTTTGGAGACAAGG
ACGTTCTTTAGAAGAAATAGCGACGATTCGGAATTTAAAGGTTGCAACGATAGAAGATCATTTTGTTGAAATTGCTTTGC
GAGAAAAAGATTTTTCTATTGAAATGTTTATGGAAAAAGAAAAGATAGACAAAGTAATAAAAGTAATTGAAGCATTGCAA
ACGCGGAAGTTACGTGTTTTGAAACAAGCGGTTGGAGAAGATATCTCTTATTTTGAAGTTCGTCTTGTATTAGCGCGGAT
GGAGGGTGTAAATGAAACTTGA

Upstream 100 bases:

>100_bases
TACAAGTATATAGTTCTTATATAATAAGTTTAATGAGCGACAGTAGATAGTGTAATTGTACTGAAAAGAATGAAGTTAAG
ATTGGAAGGTGGAAGCGGTC

Downstream 100 bases:

>100_bases
AGAATATTTATATAAGTGGTTTGGATATTCTGAATTTCGTCCAGGTCAAAAAGGAGTAATTACAGATTTATTAGAAGGAA
AAGATGTGATAGCAATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MQIQYTLLHCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRNDYDGEVAKLLQADFIQEIHENTY
VLTPTGKMQLHKWEEVYAFPAHLHGLHYGELGETFWKRLSLIIQIISNLQQNNTRFIPIQQDTEIMMWVKRFLTGRPYKR
SELARKLWTEVHNLLEKSNAIEATIVTYRLTGYERIGCTLQQLAEITKQDIFRVYFLFWGTIHFFIQEVRDKENEFPLLA
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALREKDFSIEMFMEKEKIDKVIKVIEALQ
TRKLRVLKQAVGEDISYFEVRLVLARMEGVNET

Sequences:

>Translated_353_residues
MQIQYTLLHCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRNDYDGEVAKLLQADFIQEIHENTY
VLTPTGKMQLHKWEEVYAFPAHLHGLHYGELGETFWKRLSLIIQIISNLQQNNTRFIPIQQDTEIMMWVKRFLTGRPYKR
SELARKLWTEVHNLLEKSNAIEATIVTYRLTGYERIGCTLQQLAEITKQDIFRVYFLFWGTIHFFIQEVRDKENEFPLLA
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALREKDFSIEMFMEKEKIDKVIKVIEALQ
TRKLRVLKQAVGEDISYFEVRLVLARMEGVNET
>Mature_353_residues
MQIQYTLLHCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRNDYDGEVAKLLQADFIQEIHENTY
VLTPTGKMQLHKWEEVYAFPAHLHGLHYGELGETFWKRLSLIIQIISNLQQNNTRFIPIQQDTEIMMWVKRFLTGRPYKR
SELARKLWTEVHNLLEKSNAIEATIVTYRLTGYERIGCTLQQLAEITKQDIFRVYFLFWGTIHFFIQEVRDKENEFPLLA
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALREKDFSIEMFMEKEKIDKVIKVIEALQ
TRKLRVLKQAVGEDISYFEVRLVLARMEGVNET

Specific function: Unknown

COG id: COG4955

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008308 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41786; Mature: 41786

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQYTLLHCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRNDYD
CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCC
GEVAKLLQADFIQEIHENTYVLTPTGKMQLHKWEEVYAFPAHLHGLHYGELGETFWKRLS
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LIIQIISNLQQNNTRFIPIQQDTEIMMWVKRFLTGRPYKRSELARKLWTEVHNLLEKSNA
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
IEATIVTYRLTGYERIGCTLQQLAEITKQDIFRVYFLFWGTIHFFIQEVRDKENEFPLLA
CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALREKDFSI
HHHCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEEHHHHEEEEEECCCCCH
EMFMEKEKIDKVIKVIEALQTRKLRVLKQAVGEDISYFEVRLVLARMEGVNET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIQYTLLHCLKQLNGERTVSSIYYLLKGKRSSQTLQDGNMFRISFLFGIYKSLNRNDYD
CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCC
GEVAKLLQADFIQEIHENTYVLTPTGKMQLHKWEEVYAFPAHLHGLHYGELGETFWKRLS
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LIIQIISNLQQNNTRFIPIQQDTEIMMWVKRFLTGRPYKRSELARKLWTEVHNLLEKSNA
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
IEATIVTYRLTGYERIGCTLQQLAEITKQDIFRVYFLFWGTIHFFIQEVRDKENEFPLLA
CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EIISYPNERAELFSLSTKKTYNFWRQGRSLEEIATIRNLKVATIEDHFVEIALREKDFSI
HHHCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEEHHHHEEEEEECCCCCH
EMFMEKEKIDKVIKVIEALQTRKLRVLKQAVGEDISYFEVRLVLARMEGVNET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]