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The map label for this gene is panD

Identifier: 227815612

GI number: 227815612

Start: 2765343

End: 2765726

Strand: Reverse

Name: panD

Synonym: BAMEG_3031

Alternate gene names: 227815612

Gene position: 2765726-2765343 (Counterclockwise)

Preceding gene: 227815613

Following gene: 227815611

Centisome position: 52.88

GC content: 33.33

Gene sequence:

>384_bases
ATGTTTCGCACAATGATGAGAGCGAAGTTACATCGCGCAACAGTAACAGAAGCAAATTTAAATTATGTAGGTAGTATTAC
AATTGATGAAGATTTAATGGATGCAGTAAATATTGTAGAAAATGAAAAAGTTCAAATTGTAAATAATAATAATGGTGCTC
GCTTAGAGACATATGTTATTAAAGGCGAACGAGGTAGCGGTGTTGTTTGTTTAAATGGTGCAGCTGCAAGGCTTGTACAG
CCAGGAGATAAAGTTATTATTATTTGCTACGGTTTAGTGGCAGAAGAAAATATTCATAAACAAGAGCCGAAAATTGCAGT
ATTAGATGATGATAATCAAATTATTGAAATGTTAGGTGCTGAAAAAGCGGGTACGATATTATAA

Upstream 100 bases:

>100_bases
TCAAATTGAAGGGCGAATCATTTTAGCAATTGCAGTTAAATTTGAAAATGTACGATTAATTGACAATATAACATTAACGG
TTAAATAAGGGGGAGCATCT

Downstream 100 bases:

>100_bases
GTAAGGTGGCTATCTCTATTATGGAGATAGCTTTTTTGTGCATCTTTTCATTAAGATGAGATAAAACGTGGTATAGTAAC
ATTATATAATTTTCTGTTTG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFRTMMRAKLHRATVTEANLNYVGSITIDEDLMDAVNIVENEKVQIVNNNNGARLETYVIKGERGSGVVCLNGAAARLVQ
PGDKVIIICYGLVAEENIHKQEPKIAVLDDDNQIIEMLGAEKAGTIL

Sequences:

>Translated_127_residues
MFRTMMRAKLHRATVTEANLNYVGSITIDEDLMDAVNIVENEKVQIVNNNNGARLETYVIKGERGSGVVCLNGAAARLVQ
PGDKVIIICYGLVAEENIHKQEPKIAVLDDDNQIIEMLGAEKAGTIL
>Mature_127_residues
MFRTMMRAKLHRATVTEANLNYVGSITIDEDLMDAVNIVENEKVQIVNNNNGARLETYVIKGERGSGVVCLNGAAARLVQ
PGDKVIIICYGLVAEENIHKQEPKIAVLDDDNQIIEMLGAEKAGTIL

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=114, Percent_Identity=44.7368421052632, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_BACAA (C3P5R1)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002866044.1
- ProteinModelPortal:   C3P5R1
- SMR:   C3P5R1
- EnsemblBacteria:   EBBACT00000127946
- GeneID:   7851130
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_1631
- GeneTree:   EBGT00050000002424
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13909; Mature: 13909

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTMMRAKLHRATVTEANLNYVGSITIDEDLMDAVNIVENEKVQIVNNNNGARLETYVI
CCHHHHHHHHHHHEEEECCCCEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KGERGSGVVCLNGAAARLVQPGDKVIIICYGLVAEENIHKQEPKIAVLDDDNQIIEMLGA
ECCCCCCEEEECCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEEECCHHHHHHHCC
EKAGTIL
CCCCCCC
>Mature Secondary Structure
MFRTMMRAKLHRATVTEANLNYVGSITIDEDLMDAVNIVENEKVQIVNNNNGARLETYVI
CCHHHHHHHHHHHEEEECCCCEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KGERGSGVVCLNGAAARLVQPGDKVIIICYGLVAEENIHKQEPKIAVLDDDNQIIEMLGA
ECCCCCCEEEECCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEEECCHHHHHHHCC
EKAGTIL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA