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The map label for this gene is ywqC [H]

Identifier: 227815568

GI number: 227815568

Start: 2723682

End: 2724425

Strand: Reverse

Name: ywqC [H]

Synonym: BAMEG_2982

Alternate gene names: 227815568

Gene position: 2724425-2723682 (Counterclockwise)

Preceding gene: 227815569

Following gene: 227815567

Centisome position: 52.09

GC content: 31.32

Gene sequence:

>744_bases
TTGAAGCAAGAAATTAGTATGAAGGATTTTCAACAGTTATTGAAAAGAAGGATAGTAACAATTATTTTGACGATGTGCTG
TTTAACTGTTTCTCTAATTCTTATCTCTATGTACGTATTAAAGCCTTCATATCAATATTCAACACAAATTCTCGTTGGGA
ATTTAGATGAGTTTAATAAGGAAAATTCAACAAATAAAACACAGGAAAATAAGCAACTGGTAACATCTTATGTTGATATA
TTAAAAAGTCCACTCATTATTTCAACAGTGAAAAAAACTTTGAAATTAGAGCAATCAAGTCATGAACTAGTACAAAAAAT
TTCAGTGGTGAATATGGACAACTCACAAATTGTTACTGTTACAGCAAAAGATTCGGATCCTATAATCGTAAAAGAAATTG
TAAAGTCATTGGCAGAACAATCTCAAAAAAGCTTTCAACAGTATACGAATGTGCAGGGGGTAAAAATATTAACTGATCCT
GAGTTACAGGAAAAAGCTGAAAAGTTGTTTCCGAAATTTCAACTTATCATTCCTATCTCTGTAATTGTTAGTTTTTTTGT
TGGGATAGGTTTAGCAGTATTTCGAGATTATTTTGATGAACGTATATACGTGGAACAGGATTTAGAGAAGATAACAACAG
TTCCTGTAATTGGTCACATAAATATGGAACCGAAAAGAAAAAAGGAATCTACAGAAGTTGATCCGCAATCAGCTATATAT
CGAGGTGAACATGTCGATGTTTAA

Upstream 100 bases:

>100_bases
AGTCGGAAAGTATGTAACAAAGCAAGCGAATAGAAAGAAGAAAGGGTTATCTGTAAAGAATGATGTGCAGAATATGAATC
AGACAAAGGCGGTGAAATAA

Downstream 100 bases:

>100_bases
AACAAAGAAACAGCTTCTATTTAATCCGCATGATGCTCTAATGAAAGAGCAGTTTTATACTGTGTATCACGAGTTGAAAA
AAACAGGAAAACAAGTATTC

Product: chain length determinant protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKQEISMKDFQQLLKRRIVTIILTMCCLTVSLILISMYVLKPSYQYSTQILVGNLDEFNKENSTNKTQENKQLVTSYVDI
LKSPLIISTVKKTLKLEQSSHELVQKISVVNMDNSQIVTVTAKDSDPIIVKEIVKSLAEQSQKSFQQYTNVQGVKILTDP
ELQEKAEKLFPKFQLIIPISVIVSFFVGIGLAVFRDYFDERIYVEQDLEKITTVPVIGHINMEPKRKKESTEVDPQSAIY
RGEHVDV

Sequences:

>Translated_247_residues
MKQEISMKDFQQLLKRRIVTIILTMCCLTVSLILISMYVLKPSYQYSTQILVGNLDEFNKENSTNKTQENKQLVTSYVDI
LKSPLIISTVKKTLKLEQSSHELVQKISVVNMDNSQIVTVTAKDSDPIIVKEIVKSLAEQSQKSFQQYTNVQGVKILTDP
ELQEKAEKLFPKFQLIIPISVIVSFFVGIGLAVFRDYFDERIYVEQDLEKITTVPVIGHINMEPKRKKESTEVDPQSAIY
RGEHVDV
>Mature_247_residues
MKQEISMKDFQQLLKRRIVTIILTMCCLTVSLILISMYVLKPSYQYSTQILVGNLDEFNKENSTNKTQENKQLVTSYVDI
LKSPLIISTVKKTLKLEQSSHELVQKISVVNMDNSQIVTVTAKDSDPIIVKEIVKSLAEQSQKSFQQYTNVQGVKILTDP
ELQEKAEKLFPKFQLIIPISVIVSFFVGIGLAVFRDYFDERIYVEQDLEKITTVPVIGHINMEPKRKKESTEVDPQSAIY
RGEHVDV

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 28260; Mature: 28260

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEISMKDFQQLLKRRIVTIILTMCCLTVSLILISMYVLKPSYQYSTQILVGNLDEFNK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECHHHHCC
ENSTNKTQENKQLVTSYVDILKSPLIISTVKKTLKLEQSSHELVQKISVVNMDNSQIVTV
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEE
TAKDSDPIIVKEIVKSLAEQSQKSFQQYTNVQGVKILTDPELQEKAEKLFPKFQLIIPIS
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHH
VIVSFFVGIGLAVFRDYFDERIYVEQDLEKITTVPVIGHINMEPKRKKESTEVDPQSAIY
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHH
RGEHVDV
CCCCCCC
>Mature Secondary Structure
MKQEISMKDFQQLLKRRIVTIILTMCCLTVSLILISMYVLKPSYQYSTQILVGNLDEFNK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECHHHHCC
ENSTNKTQENKQLVTSYVDILKSPLIISTVKKTLKLEQSSHELVQKISVVNMDNSQIVTV
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEE
TAKDSDPIIVKEIVKSLAEQSQKSFQQYTNVQGVKILTDPELQEKAEKLFPKFQLIIPIS
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHH
VIVSFFVGIGLAVFRDYFDERIYVEQDLEKITTVPVIGHINMEPKRKKESTEVDPQSAIY
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHH
RGEHVDV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]