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The map label for this gene is ycnJ [H]

Identifier: 227815267

GI number: 227815267

Start: 2438586

End: 2440235

Strand: Reverse

Name: ycnJ [H]

Synonym: BAMEG_2678

Alternate gene names: 227815267

Gene position: 2440235-2438586 (Counterclockwise)

Preceding gene: 227815268

Following gene: 227815266

Centisome position: 46.66

GC content: 33.82

Gene sequence:

>1650_bases
ATGAGTGTGAAAGTAATGAGAAGGATAGGGATATTGCTATTCATTGCATGTATGCTTATCATATTAATACCGAAAAGTGC
ATCTGCTCATGCGTACGTTGTGAAATCAAACCCTGCTGAAAATGAAACATTGAAGAAAGCACCATCTGTTGTGAAAATTG
AATTCGATGAGGACATACAAGTTTCAAGTTTTAATACATTGTACGTGAGAGATACATCAGGTAAAAGGGTCGATTTAAAA
GATGCTCATATTGATAAAAAGAATAAAAAGTTATTAGAAGCCGGATTAAAAGAGAATCTCAAAAACGGTCTGTACTCTAT
TCAGTGGAAAGTGATTTCAGCTGATGGCCATCCAATTCAAGGAGTTATTCCATTCCGTATTGGATTAGCAGAAGCGGAAG
CAGACGATATACAAGTGGAAGAGATGGGTTACGTCCCACAAATCGATATGATTATGGAACGTGGAATTTTATATACAAGT
TTCTCACTATTTATAGGCGTGCTATTCTTTAATCTTATTATGTATAAAGGGAACGTAATAGAAGTTCAATTAAGAAGTAA
AAAAATAATATGGATCTCCTTATTTGGGATATTGATTAGCTTGTTATTCAATCTACCATTGCAAGCGAAAATAAATGCGG
ATGTTTCATGGCTAGAAGCATTCAATCCTTTACTATTAAAAGAAACATTACAGCTTTCTGTTTTTGGTTATGTATGGATT
ACTCAAATGACTCTTATTAGTTCGCTTATAATCGTTACGTATTTTGCGATGAAGCGTGGGAAGCTTTCGTCGTTTAAAGT
ATGGAGCATTCCAATAGTATTGTTTATTGGGATACTTGTTATGAAAGCATGTAATAGTCACGCATATGGTTTAAAGTTTA
AAGACATTGCTGTCGTTATGGATTTTCTACATTTATTCGCAGCTTCATTATGGATTGGTGGTCTATCATCTATTATTCTT
CTTTTACGTAATGAGGATAACAAGTGGAGTATGTATTGGGATATGATTAAGCGTTTTTCACCGTGGGCAACATGTGCTGT
CATTGTGATTTTCATAACAGGTCTTTTTAATAGTACATTTTTTATTCCAACAATCCACTCGTTATTTGATACGAAGTATG
GATTAGCTTTATTAGCAAAGATACTTTTATTCATTTTCATGGGGATATTAGGAATTATTCATTATGTGAAAGGGAAAATG
AGAGCGGAGCAAGGATTAGGTGCTACGGTGAAAGTAGAGTTTATCATTGGAATTATCATTTTCGTAATCGTAGCTTTTAT
GACAAATGTACAAACACCACCGATGCCTCCTATTGGACCTTTTACAGAGAGTAAACAATTAGATAATGGATATGAAATGA
CGCTAAATGTAAGTCCTAATAAAGTAGGACAAAATATATTCCATATTACTTTAAAGGATGAGAACGGACAACCTGTTACT
GATATGGAACAAATTATATTAACGACTCAATCGTTAGATATGAATATGGGAAAAGGTTCATTTAAAGTTTCGGCCGTTTC
ACCGGGAGAATATGAAGCAGAAGGTATGTATATTAACATGACAGGTAACTGGAATATACAAGTACATGGATTAACAAAAT
CACTTGATAGCTTTGATACGGATTATAAGTTTATTGTAGGTGGCAGATAA

Upstream 100 bases:

>100_bases
GTGTAGAAGTTTATATTTAATTAGGTTAATATTTCGCCCGAGAATTAAACTTGGGAAGTTAAAGTTATGAAAATAGAGCG
ATGAGGAAGAAAGAAGTGAA

Downstream 100 bases:

>100_bases
AGTGAAACTTTAATCAGTGGGGTATCCCCCGCTGATTATTAGCACGCCCCCGCCTAACTTCTTTGCTTTGCGGGATAAAG
AGACGTTATAGATGAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MSVKVMRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFNTLYVRDTSGKRVDLK
DAHIDKKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTS
FSLFIGVLFFNLIMYKGNVIEVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
TQMTLISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHLFAASLWIGGLSSIIL
LLRNEDNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKM
RAEQGLGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVT
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR

Sequences:

>Translated_549_residues
MSVKVMRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFNTLYVRDTSGKRVDLK
DAHIDKKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTS
FSLFIGVLFFNLIMYKGNVIEVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
TQMTLISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHLFAASLWIGGLSSIIL
LLRNEDNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKM
RAEQGLGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVT
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR
>Mature_548_residues
SVKVMRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFNTLYVRDTSGKRVDLKD
AHIDKKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSF
SLFIGVLFFNLIMYKGNVIEVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWIT
QMTLISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHLFAASLWIGGLSSIILL
LRNEDNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMR
AEQGLGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVTD
MEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 61701; Mature: 61570

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKVMRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCEE
VSSFNTLYVRDTSGKRVDLKDAHIDKKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQ
EECCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
GVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSFSLFIGVLFFNLIMYKGNVI
EEEEEEEEECCCCCCCEEHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEE
EVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
EEEECCCEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHH
TQMTLISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVM
HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DFLHLFAASLWIGGLSSIILLLRNEDNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTF
HHHHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEE
FIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMRAEQGLGATVKVEFIIGIII
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
FVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVT
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCEEEEEEECCCCCCCH
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDT
HHHHHHHHHCCCCCCCCCCCEEEEEECCCCEECCEEEEEEECCEEEEEEEEHHHHCCCCC
DYKFIVGGR
CCEEEECCC
>Mature Secondary Structure 
SVKVMRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCEE
VSSFNTLYVRDTSGKRVDLKDAHIDKKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQ
EECCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
GVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSFSLFIGVLFFNLIMYKGNVI
EEEEEEEEECCCCCCCEEHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEE
EVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
EEEECCCEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHH
TQMTLISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVM
HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DFLHLFAASLWIGGLSSIILLLRNEDNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTF
HHHHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEE
FIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMRAEQGLGATVKVEFIIGIII
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
FVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVT
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCEEEEEEECCCCCCCH
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDT
HHHHHHHHHCCCCCCCCCCCEEEEEECCCCEECCEEEEEEECCEEEEEEEEHHHHCCCCC
DYKFIVGGR
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]