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The map label for this gene is ymfD [H]

Identifier: 227815190

GI number: 227815190

Start: 2365894

End: 2366502

Strand: Reverse

Name: ymfD [H]

Synonym: BAMEG_2601

Alternate gene names: 227815190

Gene position: 2366502-2365894 (Counterclockwise)

Preceding gene: 227815191

Following gene: 227815189

Centisome position: 45.25

GC content: 37.27

Gene sequence:

>609_bases
ATGGTAATGGTTCCGAGTTTGCTGATTGCGGCCATAGGAGGAGCGATAACTGGTTGGGTATCTTGGAAAGTTGATAATCC
CTACACTTGGATATTGATTGGTAGAGCGATTCAAGGTATTGGTGCTGCTGGTGCAATGCCAGTTGTTATACCGTGTGTTG
GTGATTTATACAAGGATGAAAAACAAGTTAGTACAGGTTTAGGAATCATAGAAACATCCAATACATTTGGGAAAGTGTTG
AGCCCTATTTTAGGATCTGCTCTTGCTGCCATTGTATGGTTTTTACCATTTTGGGCGATTCCAGTTTTATGCATAGTATC
AATTGTTTTATTACTTGTTCTAGTAAAGGCAAAGAAACAAGAAGGAGAAGTACCGCCACTTAAAGAGTTTATCAAATCTA
TTGTCGCTACGTTTCGAGAAAAGGGAAGATGGTTGGTGCAATTATTATGCTTATTTTATTCGGAATTCTCTTTTATTTGT
CAACTATATTGGAATCAAAGTATGACATTCATGGTATATGGAAAGGGTGTGTACTTGCGATTCCGTTACTTGTACTGTCA
CTTAGTTCATATATGGCTGGTAAAAAAATTGGAGATAATCAAAATGTGA

Upstream 100 bases:

>100_bases
TTCATCGTTTCAAGTATCCATGATTATTACAATTTACTCTATCGTAGCCATTCTACTTATACCGATTGCTGGTTATTTAT
CAGATCGATGGGGGAGAAAT

Downstream 100 bases:

>100_bases
TGAAGAAGTGTATTTATATTGGTTTTTTAATGGCTGCTGCATCAGTTATCATTCCTTTATTTATAAAAGGGATTTATTTA
CTACTTCTTTGTCTCGTTAT

Product: transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVL
SPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWLVQLLCLFYSEFSFIC
QLYWNQSMTFMVYGKGVYLRFRYLYCHLVHIWLVKKLEIIKM

Sequences:

>Translated_202_residues
MVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVL
SPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWLVQLLCLFYSEFSFIC
QLYWNQSMTFMVYGKGVYLRFRYLYCHLVHIWLVKKLEIIKM
>Mature_202_residues
MVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVL
SPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWLVQLLCLFYSEFSFIC
QLYWNQSMTFMVYGKGVYLRFRYLYCHLVHIWLVKKLEIIKM

Specific function: Involved in secretion of bacillibactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 22690; Mature: 22690

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDE
CCCHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHH
KQVSTGLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQ
HHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGEVPPLKEFIKSIVATFREKGRWLVQLLCLFYSEFSFICQLYWNQSMTFMVYGKGVYLR
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
FRYLYCHLVHIWLVKKLEIIKM
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDE
CCCHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHH
KQVSTGLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQ
HHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGEVPPLKEFIKSIVATFREKGRWLVQLLCLFYSEFSFICQLYWNQSMTFMVYGKGVYLR
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
FRYLYCHLVHIWLVKKLEIIKM
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]