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The map label for this gene is tsr [C]

Identifier: 227815166

GI number: 227815166

Start: 2347761

End: 2349641

Strand: Reverse

Name: tsr [C]

Synonym: BAMEG_2577

Alternate gene names: 227815166

Gene position: 2349641-2347761 (Counterclockwise)

Preceding gene: 227815167

Following gene: 227815165

Centisome position: 44.93

GC content: 35.03

Gene sequence:

>1881_bases
ATGTCTTATCAAACAGCTAAAAAGAATTTTGAATCACAAATTACGAGTAGTGCTCACGACAATATAAAAATATTAGATAA
TTTAATTAATCAAATGATTGAGGCAAAATTTAATGATGTAAATAATTTTGCACGGGTGATTCAAGGTAATATGTATCAAG
GGGATAATCAAGATGAATTAAGAAAAATGTTATCTCAATATATCAACTTGAATAAAGATGTTGAACAAGTATATGTTGCT
GGAAATGATAAAAAATTTGTACAAGAACCAAATATACAAATGGCGGCAGACTATGATCCAACAGAACGTTCTTGGTATAA
AGATGCAGTAGCAAAACAAGGTGGTATTGTAATTACTGAGCCGTATAAAGCAAAGGGAAATGGACATATTGTCGTAACGA
TTGCAAAACAAACAGAAGATAAAAACGGTGTTGTAGCGATAGATTTAAGTTTAGATAACCTATTAAAAACAACAAAGTTA
ATCAATATTGGTAAAAAAGGATATGCTTTCATTTTAGATGGGAAACAAAAAATAATTGCACATCCTCAAGAGAAGTCAGG
AGAAAAAGCAGCTGATTCTTGGGCGAAGAAAATTTATGAAGATAATCATGGTGCTTTTTCATATACGTATGACGGTAGCG
AAAAGCAAATGGTATTTGCTACAAATGTAAAAACGGGTTGGAAAATTGGCGGGACGATGTACTCAAATGAAGTAATTGAA
GCTGCACAGCCTGTATTTTATAATATGTTAATTGTTATGTTCATTTCATTAGTTATAGGCGGGGCTCTTATTTATTTCGT
GACACTTTCTATTACGAAGCCATTAAAAAGATTAGTTGCCACTTCTAAAGAAATAAGTGAGGGAGATTTAACGCAAACAA
TTGATATTCATTCTAATGATGAAATTGGTCAACTTGCAAAAGGATTTAATGAGATGACTGATGCGTTGCGAACGTTAATC
GGAAGAATCAATACTTCGGCTGGACATGTTGCAGCAGCATCAGAAGAGCTCACGGCAAGTGTAAGACAGGCGAGTGAAGC
GACTGAGCAAATTACGATGGCAATGGATGAAATATCGAGCGGGGCAACAACGCAAACGACAAGTGTAGAAAATGGTGCAA
TGTTATTATTTGATGTAACAGAAGGAATTCAGCATGTAGCAAATAGTTCATCATCGATTAATACGGCTTCTGCTCATACT
CGTGAAAAAGCAGAAGATGGTGGAAAACTAGTAGGAAAAACAGTAAACCAAATGCAGTCTATTGCAGAATCTGTTTCACA
ATCGGATGAAGTTATACAGTTATTAAATAATAAATCAAAGCAAATTGGTGACATACTAGAAGTCATTCAAAATATTGCAG
ATCAAACAAACCTTCTAGCTTTGAATGCAGCAATTGAAGCTGCAAGAGCAGGAGAGCATGGAAGAGGATTTGCAATTGTT
GCAGATGAAGTACGTAAATTGGCTGAGAAGTCTAGCGTGTCTTCTAGTGAAATTAGTAAATTAATATGTGAAATACAAGA
TGACATGAGTAAGACGGTAAAGTCTATGGGTCATGTAAATGAGGAAGTTCAATCTGGACTTGTTATTGCGAATGAAACGA
AGCAAAACTTTACTGAGATTTTACAATCTACAAATGAAATTGCAGATCAAATTAAAACGATGGTTGAAACAGCTAACGGG
ATGTCAAAAGGTGCAAATGAAGTGTCTATTTCGGTTGGGCAAATTGCAATGACAGCGCAGAATAATGCGACGAGTACTCA
AAACGTTGCAGCATCAGCGGAAGAACAATTAGCTTCGATGGAGGAAATTGGTTCTGCAGCTGGTACGCTTTCTCAAATGG
CTGAAGAGTTACAAGTATTAATTGAAAGATTTAAAGTTTAA

Upstream 100 bases:

>100_bases
TGGGTAGACTATTAAATTCGTTTCGTGATATGAAAGTAGCAAAAAACTACTAATTTCATTTTTCGTCATTTTAATTGCGG
CTGTCTCTATTATCGGAGGC

Downstream 100 bases:

>100_bases
TAGAGAACAGACTACTCCAAAATAGCAGTATGCTATTGGAGTAGTCTGTTTTTTTTTTTGTAAAATTAAATAGAAATGGA
CAATACTTTTATGAGGTTTA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MSYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARVIQGNMYQGDNQDELRKMLSQYINLNKDVEQVYVA
GNDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKGNGHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKL
INIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAFSYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIE
AAQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEISEGDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLI
GRINTSAGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQTTSVENGAMLLFDVTEGIQHVANSSSSINTASAHT
REKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDILEVIQNIADQTNLLALNAAIEAARAGEHGRGFAIV
ADEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSGLVIANETKQNFTEILQSTNEIADQIKTMVETANG
MSKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSAAGTLSQMAEELQVLIERFKV

Sequences:

>Translated_626_residues
MSYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARVIQGNMYQGDNQDELRKMLSQYINLNKDVEQVYVA
GNDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKGNGHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKL
INIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAFSYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIE
AAQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEISEGDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLI
GRINTSAGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQTTSVENGAMLLFDVTEGIQHVANSSSSINTASAHT
REKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDILEVIQNIADQTNLLALNAAIEAARAGEHGRGFAIV
ADEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSGLVIANETKQNFTEILQSTNEIADQIKTMVETANG
MSKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSAAGTLSQMAEELQVLIERFKV
>Mature_625_residues
SYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARVIQGNMYQGDNQDELRKMLSQYINLNKDVEQVYVAG
NDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITEPYKAKGNGHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKLI
NIGKKGYAFILDGKQKIIAHPQEKSGEKAADSWAKKIYEDNHGAFSYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIEA
AQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEISEGDLTQTIDIHSNDEIGQLAKGFNEMTDALRTLIG
RINTSAGHVAAASEELTASVRQASEATEQITMAMDEISSGATTQTTSVENGAMLLFDVTEGIQHVANSSSSINTASAHTR
EKAEDGGKLVGKTVNQMQSIAESVSQSDEVIQLLNNKSKQIGDILEVIQNIADQTNLLALNAAIEAARAGEHGRGFAIVA
DEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSGLVIANETKQNFTEILQSTNEIADQIKTMVETANGM
SKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASMEEIGSAAGTLSQMAEELQVLIERFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=337, Percent_Identity=29.3768545994065, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1788195, Length=320, Percent_Identity=30.625, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787690, Length=363, Percent_Identity=29.4765840220386, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=29.6495956873315, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789453, Length=333, Percent_Identity=27.9279279279279, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 68027; Mature: 67896

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARVIQGNMYQGDNQDEL
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RKMLSQYINLNKDVEQVYVAGNDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITE
HHHHHHHHCCCCCCHHEEEECCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEC
PYKAKGNGHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKLINIGKKGYAFILDGKQKIIA
CCCCCCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCHHHHC
HPQEKSGEKAADSWAKKIYEDNHGAFSYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIE
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEECCCHHHHHHHH
AAQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEISEGDLTQTIDIHSND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
EIGQLAKGFNEMTDALRTLIGRINTSAGHVAAASEELTASVRQASEATEQITMAMDEISS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GATTQTTSVENGAMLLFDVTEGIQHVANSSSSINTASAHTREKAEDGGKLVGKTVNQMQS
CCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
IAESVSQSDEVIQLLNNKSKQIGDILEVIQNIADQTNLLALNAAIEAARAGEHGRGFAIV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEE
ADEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSGLVIANETKQNFTEI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH
LQSTNEIADQIKTMVETANGMSKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASM
HHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHH
EEIGSAAGTLSQMAEELQVLIERFKV
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYQTAKKNFESQITSSAHDNIKILDNLINQMIEAKFNDVNNFARVIQGNMYQGDNQDEL
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RKMLSQYINLNKDVEQVYVAGNDKKFVQEPNIQMAADYDPTERSWYKDAVAKQGGIVITE
HHHHHHHHCCCCCCHHEEEECCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEC
PYKAKGNGHIVVTIAKQTEDKNGVVAIDLSLDNLLKTTKLINIGKKGYAFILDGKQKIIA
CCCCCCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCHHHHC
HPQEKSGEKAADSWAKKIYEDNHGAFSYTYDGSEKQMVFATNVKTGWKIGGTMYSNEVIE
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEECCCHHHHHHHH
AAQPVFYNMLIVMFISLVIGGALIYFVTLSITKPLKRLVATSKEISEGDLTQTIDIHSND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
EIGQLAKGFNEMTDALRTLIGRINTSAGHVAAASEELTASVRQASEATEQITMAMDEISS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GATTQTTSVENGAMLLFDVTEGIQHVANSSSSINTASAHTREKAEDGGKLVGKTVNQMQS
CCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
IAESVSQSDEVIQLLNNKSKQIGDILEVIQNIADQTNLLALNAAIEAARAGEHGRGFAIV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEE
ADEVRKLAEKSSVSSSEISKLICEIQDDMSKTVKSMGHVNEEVQSGLVIANETKQNFTEI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH
LQSTNEIADQIKTMVETANGMSKGANEVSISVGQIAMTAQNNATSTQNVAASAEEQLASM
HHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHH
EEIGSAAGTLSQMAEELQVLIERFKV
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA