Click here to switch to the map view.

The map label for this gene is ybbJ [C]

Identifier: 227815106

GI number: 227815106

Start: 2295423

End: 2295851

Strand: Reverse

Name: ybbJ [C]

Synonym: BAMEG_2517

Alternate gene names: 227815106

Gene position: 2295851-2295423 (Counterclockwise)

Preceding gene: 227815108

Following gene: 227815105

Centisome position: 43.9

GC content: 36.36

Gene sequence:

>429_bases
ATGGCTGCTTGGGTAATTTGGTTTATCATAGCTGGTATTTTATTTATTGCGGAAATGCTGTCGATTACGTTTTACATGCT
TTGGCTTGGAATTGGAGCTGTTGTCGGAGGTCTTATTGCTTTATTTGCCCCTGAAGCACTACTATTACAAGTTGTTGCTG
GTGCGATTGTAAGTTTAACATTGACTTTCTTTACGAAAAGAATATCAAAAAACTTTCGAGAAGCAAAAGGTTTTACTGAT
ACAGTAGATATGTTGGTCGGTAAAAAAGGGATTGTCATGCAAGCGATTACAAAAGAAACGAATGGTATTGTGAAGGTGGA
TGGAGATACTTGGACAGCTGTTGCAGATGCTCCAATTGATACTGGAGAAAAAGTTGTTGTTATAAAGAGAAATAGTACTA
TATTACAAGTGAAAAAGGAGAGTGAATAA

Upstream 100 bases:

>100_bases
ACAATAGCTTGTAGTAAGCGCCCACGTATGAGAAAGGGCGGATAAACCATTCTTTTCTTCATATACATATAGAAAATGAG
AAAGAAAGTGAGGGTTGCAT

Downstream 100 bases:

>100_bases
ATATGGTAGCATTAACGTTAACGATTATTTTCGCACTAATTGTTGTTACATTTATCGCATTGACAATCAAAATTATTCCA
CAGCAAAAAGTTGGAGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFAPEALLLQVVAGAIVSLTLTFFTKRISKNFREAKGFTD
TVDMLVGKKGIVMQAITKETNGIVKVDGDTWTAVADAPIDTGEKVVVIKRNSTILQVKKESE

Sequences:

>Translated_142_residues
MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFAPEALLLQVVAGAIVSLTLTFFTKRISKNFREAKGFTD
TVDMLVGKKGIVMQAITKETNGIVKVDGDTWTAVADAPIDTGEKVVVIKRNSTILQVKKESE
>Mature_141_residues
AAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFAPEALLLQVVAGAIVSLTLTFFTKRISKNFREAKGFTDT
VDMLVGKKGIVMQAITKETNGIVKVDGDTWTAVADAPIDTGEKVVVIKRNSTILQVKKESE

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15421; Mature: 15289

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFAPEALLLQVVAGAIVSLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LTFFTKRISKNFREAKGFTDTVDMLVGKKGIVMQAITKETNGIVKVDGDTWTAVADAPID
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCC
TGEKVVVIKRNSTILQVKKESE
CCCEEEEEECCCEEEEEECCCC
>Mature Secondary Structure 
AAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFAPEALLLQVVAGAIVSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LTFFTKRISKNFREAKGFTDTVDMLVGKKGIVMQAITKETNGIVKVDGDTWTAVADAPID
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCC
TGEKVVVIKRNSTILQVKKESE
CCCEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA