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The map label for this gene is fecI [C]

Identifier: 227814737

GI number: 227814737

Start: 1953471

End: 1954340

Strand: Reverse

Name: fecI [C]

Synonym: BAMEG_2147

Alternate gene names: 227814737

Gene position: 1954340-1953471 (Counterclockwise)

Preceding gene: 227814738

Following gene: 227814734

Centisome position: 37.37

GC content: 35.06

Gene sequence:

>870_bases
ATGGAAACGGAGCAATTATATGAAGCGTATCAACCATTATTATTTTCGTTAGCATATAGAATCCTTGGGAGTGTTATGGA
TGCTGAGGATATCGTTCAGGATGTATTTATCTCGTTAAATAATATAGAGAATCTTCAGTCTATAGAAAATATGAAAGCAT
TTTTGTGTAAGATGGCGACAAATCGTTCAATTGATAAATTACGTTCGGCAGCGCATAAACGTAACGTGTACGTAGGGATG
TGGTTACCAGAGCCACTTGTAGAAGAAAGTAATGAGCCATCAGAGTCATTTGTTATGAAAGAATCCCTTTCCACAGCATA
TTTATTACTTTTACAACAACTGTCTGAGGTAGAAAGGATTGTTTTCATATTAAGAGAGGTTTTCAGTTATGAATACGAAG
AAATAGCTTCAATTGTTGATAAGAGTAGTGTGAACTGTAGGAAGATTTTTCAACGGGCACGAAAAAGTATATTGGATAAG
CCGAAGCAATCGACATTAAGTACGAAGAAAATGGCTGCTTACGTTGAAAAGTTTGTATCATCATTACAGTGTGGGGATGC
GCAAGGTATGTTAGAAGTATTAAAAACAGATGCTATACTCAAAGCTGATGGTGGTGGTAAAGTTACGACTGCAATTCATC
CGATTTACTCTGCGGATCGAATTATACGTTTGTTCTTTGGGATTGCGCAACGATTGACAGAAGCGTACACTGTTGATTTC
AAAATGGTAAATGGTATGCCAGGAGTTATAGTTACAATAAATAATAAAATAACATATGTTCTTTCGTTCGCATTTGAGGA
TGAGAAGATTTCAAACATTTATATGGTAGGTAATCCTGAGAAACTTATGCATTTAAATGTAAAAATATAA

Upstream 100 bases:

>100_bases
TGGACTGGGCATGATGAAATATTAGCTGATGCTGCAGTAGCAAGTGGAAAACGTGCAGCGTTACAAATTTTAAAGCAATT
AGAAAGTGAGGGAGTTCATC

Downstream 100 bases:

>100_bases
AAAACGCATTTCTTCAGAAATGCGTTTTTTATATTTTTATTATTTTTCTAACATTTCAAGAGGGACATCTTTTTCGCCAG
CTACCTCAAATTTGATTTCC

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma Factor Sigma; RNA Polymerase; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70-Like Factor; RNA Polymerase ECF-Type Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
METEQLYEAYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIENLQSIENMKAFLCKMATNRSIDKLRSAAHKRNVYVGM
WLPEPLVEESNEPSESFVMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNCRKIFQRARKSILDK
PKQSTLSTKKMAAYVEKFVSSLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFFGIAQRLTEAYTVDF
KMVNGMPGVIVTINNKITYVLSFAFEDEKISNIYMVGNPEKLMHLNVKI

Sequences:

>Translated_289_residues
METEQLYEAYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIENLQSIENMKAFLCKMATNRSIDKLRSAAHKRNVYVGM
WLPEPLVEESNEPSESFVMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNCRKIFQRARKSILDK
PKQSTLSTKKMAAYVEKFVSSLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFFGIAQRLTEAYTVDF
KMVNGMPGVIVTINNKITYVLSFAFEDEKISNIYMVGNPEKLMHLNVKI
>Mature_289_residues
METEQLYEAYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIENLQSIENMKAFLCKMATNRSIDKLRSAAHKRNVYVGM
WLPEPLVEESNEPSESFVMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNCRKIFQRARKSILDK
PKQSTLSTKKMAAYVEKFVSSLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFFGIAQRLTEAYTVDF
KMVNGMPGVIVTINNKITYVLSFAFEDEKISNIYMVGNPEKLMHLNVKI

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32831; Mature: 32831

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEQLYEAYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIENLQSIENMKAFLCKMAT
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRSIDKLRSAAHKRNVYVGMWLPEPLVEESNEPSESFVMKESLSTAYLLLLQQLSEVERI
CCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFILREVFSYEYEEIASIVDKSSVNCRKIFQRARKSILDKPKQSTLSTKKMAAYVEKFVS
HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFFGIAQRLTEAYTVDF
HHCCCCHHHHHHHHHHCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEE
KMVNGMPGVIVTINNKITYVLSFAFEDEKISNIYMVGNPEKLMHLNVKI
EEECCCCCEEEEECCCEEEEEEEEECCCCCCEEEEECCCCCEEEEEECC
>Mature Secondary Structure
METEQLYEAYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIENLQSIENMKAFLCKMAT
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRSIDKLRSAAHKRNVYVGMWLPEPLVEESNEPSESFVMKESLSTAYLLLLQQLSEVERI
CCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFILREVFSYEYEEIASIVDKSSVNCRKIFQRARKSILDKPKQSTLSTKKMAAYVEKFVS
HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFFGIAQRLTEAYTVDF
HHCCCCHHHHHHHHHHCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEE
KMVNGMPGVIVTINNKITYVLSFAFEDEKISNIYMVGNPEKLMHLNVKI
EEECCCCCEEEEECCCEEEEEEEEECCCCCCEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA