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The map label for this gene is ypeB [H]

Identifier: 227814440

GI number: 227814440

Start: 1676398

End: 1677738

Strand: Direct

Name: ypeB [H]

Synonym: BAMEG_1848

Alternate gene names: 227814440

Gene position: 1676398-1677738 (Clockwise)

Preceding gene: 227814439

Following gene: 227814441

Centisome position: 32.05

GC content: 35.05

Gene sequence:

>1341_bases
ATGTTACGAGGTATTATAATCGTATTATTAACAATCGGTGTAGTCGGCACAGGGTACTGGGGCTATAAAGAGCATCAAGA
GAAGAATGCAGTATTAATTCGGGCAGAAAATAGCTATCAACGTGCGTTTCACGATTTAGCGTACGAGGTAGATTTATTAC
ACGATAAAATTGGTACAACGCTTGCGATGAATTCACGTGCATCTTTATCACCTGCATTAGCAGATGTATGGAGATTAACA
TCTGAAGCTCGTTCAGATGTAGGGCAACTTCCTTTAACATTAATGCCTTTTAATAAAACGGAAGAATTTTTAGCGAATAT
CGGTGATTTTAGTTACCGTGCAGCTATTCGTGATCTAGAAAAAGAGCCGTTAAATGATCAAGAATACAAAACGTTGCAAA
CTTTATACTCAAATGCCGGAAATATACAAGATGAACTAAGAAAAGTGCAACATCTTGTTTTGAAAAACAATTTACGCTGG
ATGGATGTTGAGATGGCACTCGCATCCAATCGTGATCCTGCCGACAATACAATTATTGACGGACTAAAGACAGTAGAAAA
AAATGTAACATCGTATTCATCTACAAACTTCGGACCTACCTTTACAAGTGCACAAAAAAATAAAAAAGGTGGATTTGAAG
CAGAAGGAAAAGCAATTTCAAAAGATGAAGCGGGGAAAATCGCAAAATCGTTCTTGAATTTAAAAGGAAATGAAAAAGTA
GAAGTTGAGAAAAGTGGAAAAGGTGCAAAAGAATCTTTCTATAGTGTGAAAATTAAAGATGAAGCAACGAATAATGAGTT
TTATATGGATATTACCGGAAAAGGCGGATATCCAATTTGGGTTATGAATAATCGAGAAATTAAAGAACAGAAGATTAGTT
TAAATGACGCAGGAAGTAAAGGTTTGAAATTCTTAAAGGACCATAAGTTTAATAATATGGAGCTTTATGATAGCTCACAA
TATGATAATGTTGGAGTATTTACGTATGTAGTAAATGTGAATGGCGTACGAATTTATCCTGAAGCAATTCAAATGAAAAT
TGCTTTAGATGACGGTTCTATCGTTGGATTCTCCGCAAAAGAATATTTAGCGTCACATCAAAAACGAACAGTTCCATCAG
CAAAACTAACTGCAGCAGAAGCAAGAAAGAAAATCAATCCAGATGTGAAAGTTATGGAAGAACGTAAAGCTGTCGTAGTA
AATGATCTGCATAATGAAGTACTTTGCTATGAATTTGTAGGTACGTTAGGGAAAGATACGTACCAAATCTTCATTAATGC
AAATAGCGGAGCAGAAGAAAAAGTGAAGAAAATGCAGGCTGTTGAAAAAATTTATGATTAA

Upstream 100 bases:

>100_bases
CTTCAATCCAGATACTGCAACAAGTAAATGGATTTGGACTCGTCCACAAATTAAAAAGATCGGGAAACATATTTTCTGTA
AATAGAGCGGAGGTGGAACT

Downstream 100 bases:

>100_bases
ACTTTAATGGTAAAGTGGTGAGAATAATGAAAATCTTAATATATATATTGATGGTTTGTTTTTTAATAACTGGATGTAGT
ATTGGAAAAAAGGATAGTCC

Product: germination protein YpeB

Products: NA

Alternate protein names: PSPA12 [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRASLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNDQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAGKIAKSFLNLKGNEKV
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNVNGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD

Sequences:

>Translated_446_residues
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRASLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNDQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAGKIAKSFLNLKGNEKV
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNVNGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD
>Mature_446_residues
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTTLAMNSRASLSPALADVWRLT
SEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLEKEPLNDQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRW
MDVEMALASNRDPADNTIIDGLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAGKIAKSFLNLKGNEKV
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSKGLKFLKDHKFNNMELYDSSQ
YDNVGVFTYVVNVNGVRIYPEAIQMKIALDDGSIVGFSAKEYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVV
NDLHNEVLCYEFVGTLGKDTYQIFINANSGAEEKVKKMQAVEKIYD

Specific function: Required for spore cortex hydrolysis during germination. Appears to be required for either expression, localization, activation or function of sleB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ypeB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014239 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50037; Mature: 50037

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTT
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCE
LAMNSRASLSPALADVWRLTSEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLE
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHH
KEPLNDQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRWMDVEMALASNRDPADNTIID
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHH
GLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAGKIAKSFLNLKGNEKV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSK
EEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCH
GLKFLKDHKFNNMELYDSSQYDNVGVFTYVVNVNGVRIYPEAIQMKIALDDGSIVGFSAK
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCEEEEHHHEEEEEEECCCCEEECCHH
EYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVVNDLHNEVLCYEFVGTLGKDT
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHCCHHHHHHHHHHCCCCE
YQIFINANSGAEEKVKKMQAVEKIYD
EEEEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRGIIIVLLTIGVVGTGYWGYKEHQEKNAVLIRAENSYQRAFHDLAYEVDLLHDKIGTT
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCE
LAMNSRASLSPALADVWRLTSEARSDVGQLPLTLMPFNKTEEFLANIGDFSYRAAIRDLE
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHH
KEPLNDQEYKTLQTLYSNAGNIQDELRKVQHLVLKNNLRWMDVEMALASNRDPADNTIID
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHH
GLKTVEKNVTSYSSTNFGPTFTSAQKNKKGGFEAEGKAISKDEAGKIAKSFLNLKGNEKV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
EVEKSGKGAKESFYSVKIKDEATNNEFYMDITGKGGYPIWVMNNREIKEQKISLNDAGSK
EEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCH
GLKFLKDHKFNNMELYDSSQYDNVGVFTYVVNVNGVRIYPEAIQMKIALDDGSIVGFSAK
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCEEEEHHHEEEEEEECCCCEEECCHH
EYLASHQKRTVPSAKLTAAEARKKINPDVKVMEERKAVVVNDLHNEVLCYEFVGTLGKDT
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEEHHCCHHHHHHHHHHCCCCE
YQIFINANSGAEEKVKKMQAVEKIYD
EEEEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 8830707; 3145906; 10658652; 12177332 [H]