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The map label for this gene is ycdQ [C]

Identifier: 227814175

GI number: 227814175

Start: 1449581

End: 1451119

Strand: Direct

Name: ycdQ [C]

Synonym: BAMEG_1583

Alternate gene names: 227814175

Gene position: 1449581-1451119 (Clockwise)

Preceding gene: 227814174

Following gene: 227814176

Centisome position: 27.72

GC content: 33.2

Gene sequence:

>1539_bases
GTGGAAGAAGAACAAAAAGAAGCAGAGCTATCAGTTGTTATAGTTTTAGGAGAAGAAAAATCGAAGTTGAATCAGATTTT
AAATAAATTGCAGCATATAAAACCAATAGAAATTATTATTGTAGCTGATGATAGAATGAGTGCTATACAATCTATACCAA
CATTTGTTGAATGTAACGTTGTTGTGATTGAAGAGAAAAATAAATGGAAAGCACCAGTTCATGGGGCGAAAGTTGCCAAT
GGGGATGTAGTTTTATTTTTAGATGGAGAAGATGTTATTTTTTCGGTAGAATTAGAACGATTTATAGAACCGCTACTAAA
AAAGGAACAGGATGTAATTTTGAATAACATAGACTCCGTATGTTTTGAAAAGATGAGAGTAGAATGGCCAAGCATTGCAA
TGGTGTATAGAAAAATAGTAAACGATGTATTGGGGCGTATGGATTTAAAATATGATTCGATGTTATCTATGCCATATGCT
ATTACTAAAAAAGCGATTAAAGACATTGGATATGATATCTTGCAGAACCCTATTCTATCCCAAGTAACTCTTATTGAGAA
AGGATGGCCACTACATTCCTCGTCAGCCATCACTAACACTTCTTTAAATAATATAACCTCAAACAACACCTCTTTCTATA
AAAATGAATTAACTAAATTAGAAGTATGTGAGATTAAAGAGAATGTAAAAGCTTTGGAAAGTTGGTTACAACGAAAAGAT
GATAGAGGGAACTATACAGATGGAGGAAGAAAAAGAGAAGTTATAGAGCAACTAAAAAAACAGAAGAATTATTCACTTTT
TCATAAAGGATGGGGAATGAATTCCTCTATTTATAATGGAAAACAGTTATCAATTATTATACCAGCGCAAAATGAAGAAG
CAACAATTAAAGAAGTTATTCTTGAGGCAAGAAAAATTGAACCGAAAGAAATAATTGTTGTAATTAATGGATCAACAGAT
CAAACAGAAGCAATTGCTAAGCAATTAGGAGCTACAGTAATTGTTTATGAAGAAGCATTAGGGCATGATGTAGGACGTGC
TATTGGTGCACAAGAAGCCACAGGAGATATACTTCTCTTTATTGATGCTGACTTTGCTATTCCAGCAAAAGATCTTCATC
CATTAACGAAGGCTGTTGTGGATGGGGTTGATATAGCTTTAAACGATTTAAATTTAAATCTGAGATTTCCTCTATATATT
GTAAATTTATATAAATATATGTTGAATATTGCTTGTAATCGTAAAGATTTAGGAGTGGGATCCACAATTGCTGTTCCTCA
TGCTATTAGTAGAAAATGTTTAGAGGGAATCGGCTGGGATACACTTCACACATCTTGTGTTGCGCAAGTAAAGGCAATAT
TAGAAGGATATAAAGTCGAATGTGTCCATTTTGTAGATGTAATGAAACCAAATCGTATTCGGCCACAAGAGCATTTTGCC
ACGATAGGACATCCACCAGCTGTACTGAGAATTACTGGGGATCATTTAGAAGGACTTTCATATTTATTGAAGCATAGGGA
TTTTAAAGATTTATTTTAA

Upstream 100 bases:

>100_bases
AAATTATAATAGACTTATATTTTGATAAAAAAGCAGGGCATGCAGCTGTAGGGAAAAGTGAAACAATTGAATATATAAAA
AAGTAAAGCCTAATCAGACT

Downstream 100 bases:

>100_bases
AAGGTAAATTTGTCTATTGATTGAGTAATATAAACATTTCATTTAAGCAACTTGACGATATTTAGTATTGCGATGAAACT
AAATCAAAAGTTTTTATTAT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase/Glycosyltransferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MEEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVAN
GDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYA
ITKKAIKDIGYDILQNPILSQVTLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKD
DRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTD
QTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYI
VNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFA
TIGHPPAVLRITGDHLEGLSYLLKHRDFKDLF

Sequences:

>Translated_512_residues
MEEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVAN
GDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYA
ITKKAIKDIGYDILQNPILSQVTLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKD
DRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTD
QTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYI
VNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFA
TIGHPPAVLRITGDHLEGLSYLLKHRDFKDLF
>Mature_512_residues
MEEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVAN
GDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYA
ITKKAIKDIGYDILQNPILSQVTLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKD
DRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTD
QTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYI
VNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFA
TIGHPPAVLRITGDHLEGLSYLLKHRDFKDLF

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57636; Mature: 57636

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNV
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEE
VVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSV
EEEECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHH
CFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIKDIGYDILQNPILS
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCHHHHCCCHHH
QVTLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKD
HEEHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHHCCC
DRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVI
CCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
LEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLF
HHHHCCCCEEEEEEEECCCCHHHHHHHHHCCEEEEEEHHHCCHHHHHCCCCCCCCCEEEE
IDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVG
EECCCCCCHHHHHHHHHHHHCCCEEEEEECEEEEECHHHHHHHHHHHHHHHCCCCCCCCC
STIAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFA
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCHHHHH
TIGHPPAVLRITGDHLEGLSYLLKHRDFKDLF
CCCCCCEEEEEECCHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MEEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNV
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEE
VVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSV
EEEECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHH
CFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIKDIGYDILQNPILS
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCHHHHCCCHHH
QVTLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKD
HEEHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHHCCC
DRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVI
CCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
LEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLF
HHHHCCCCEEEEEEEECCCCHHHHHHHHHCCEEEEEEHHHCCHHHHHCCCCCCCCCEEEE
IDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVG
EECCCCCCHHHHHHHHHHHHCCCEEEEEECEEEEECHHHHHHHHHHHHHHHCCCCCCCCC
STIAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFA
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCHHHHH
TIGHPPAVLRITGDHLEGLSYLLKHRDFKDLF
CCCCCCEEEEEECCHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA