| Definition | Bacillus anthracis str. CDC 684, complete genome. |
|---|---|
| Accession | NC_012581 |
| Length | 5,230,115 |
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The map label for this gene is ygfF [C]
Identifier: 227814001
GI number: 227814001
Start: 1287469
End: 1288233
Strand: Direct
Name: ygfF [C]
Synonym: BAMEG_1408
Alternate gene names: 227814001
Gene position: 1287469-1288233 (Clockwise)
Preceding gene: 227813999
Following gene: 227814002
Centisome position: 24.62
GC content: 39.22
Gene sequence:
>765_bases ATGAAGAATCTTGATGGGAAAGTAGCGTTAGTAACAGGGGCGAGTCGCGGTATTGGTCGTGCGATTGCGATGAGATTGGC AAACGACGGTGCATTAGTTGCGATTCACTACGGCCGGAATAAGCAAGCTGCAGATGAAACAATTAGGGAGATTGAATCTA ATGAAGGAAAGGCATTTTTAATTGAAGCTGATCTTAATTCAATCGATGGTGTTAAAAAGCTAGTAGAACAATTAAAGAAT GAATTACAAATAAGAGTTGGTACATCAGAGATTGATATTTTAGTAAACAATGCAGGGATAGGTACACAAGGGACGATTGA AAATACGACAGAAGAAATTTTTGATGAAATTATGGCCGTAAATATTAAGGCGCCGTTCTTCTTAATTCAGCAAACATTAC CGTTACTACGAGCAGAGGGGCGCGTTATTAACATTTCATCAGCTGAAGTAAGACTTGGTTTTACAGGATCCATTGCATAC GGTTTAAGTAAAGGTGCACTCAATACGATGACACTGCCTCTAGCTAAACATCTTGGAGAAAGAGGTATAACAGTGAATAC AATTATGCCTGGATATACGAAGACAGATATCAATGCAAAATTGCTAGATGATCCGGAAATACGAAATTTTGCTGCGAATT CATCTGTGTTCGGACGAATAGGGCAAGTTGAAGATATTGCAGATGCAGTAGCATTCCTTGCTGCTTCTGATAGTCGATGG GTAACGGGGCAAATTATAGATGTTTCTGGTGGATTTTGTTTATAG
Upstream 100 bases:
>100_bases GAACTAAATTACCTATAAATCTATATTTTAAAATATTGCTGTTTGAATAAAAATATAAGTATAGGTTTTATCAAACAGAA ATTTAGGAAGGATGGAAAAA
Downstream 100 bases:
>100_bases AAGGAAAACAGCTTATGACCATCAAGCGAATGAATTGAGATATCCCCAAAAACAGATTCTTATAAATAACTAGGAAATTT ATTGTAATCAAAGTTTAGAT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNEGKAFLIEADLNSIDGVKKLVEQLKN ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAY GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFAANSSVFGRIGQVEDIADAVAFLAASDSRW VTGQIIDVSGGFCL
Sequences:
>Translated_254_residues MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNEGKAFLIEADLNSIDGVKKLVEQLKN ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAY GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFAANSSVFGRIGQVEDIADAVAFLAASDSRW VTGQIIDVSGGFCL >Mature_254_residues MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNEGKAFLIEADLNSIDGVKKLVEQLKN ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAY GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFAANSSVFGRIGQVEDIADAVAFLAASDSRW VTGQIIDVSGGFCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=33.7164750957854, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=33.0677290836653, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=34.6456692913386, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=28.6274509803922, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI33667109, Length=201, Percent_Identity=35.3233830845771, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI209862901, Length=227, Percent_Identity=30.3964757709251, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI19923983, Length=227, Percent_Identity=30.3964757709251, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI40254992, Length=250, Percent_Identity=28.4, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=29.9212598425197, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI66933014, Length=264, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI20149619, Length=203, Percent_Identity=30.5418719211823, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI59889578, Length=210, Percent_Identity=33.8095238095238, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI19923817, Length=269, Percent_Identity=25.6505576208178, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI4504505, Length=197, Percent_Identity=31.4720812182741, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI126723191, Length=188, Percent_Identity=31.3829787234043, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI40807363, Length=204, Percent_Identity=27.4509803921569, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4758504, Length=264, Percent_Identity=28.030303030303, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4503817, Length=202, Percent_Identity=26.7326732673267, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI40254986, Length=213, Percent_Identity=30.0469483568075, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=34.2629482071713, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1787335, Length=255, Percent_Identity=35.6862745098039, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=34.2412451361868, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=33.4645669291339, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=32.1428571428571, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=29.0196078431373, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=31.7460317460317, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=34, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786812, Length=263, Percent_Identity=30.4182509505703, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI87082100, Length=265, Percent_Identity=29.811320754717, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787526, Length=256, Percent_Identity=30.078125, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=27.3076923076923, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=36.4341085271318, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=31.2252964426877, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25147288, Length=260, Percent_Identity=31.1538461538462, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=30.4347826086957, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=34.3173431734317, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=32.6007326007326, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=30.9236947791165, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=29.9212598425197, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=30.5555555555556, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562906, Length=277, Percent_Identity=34.2960288808664, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17531453, Length=276, Percent_Identity=34.0579710144928, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=30.7971014492754, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17562908, Length=274, Percent_Identity=32.4817518248175, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17555612, Length=262, Percent_Identity=32.0610687022901, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17538480, Length=273, Percent_Identity=30.03663003663, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI193204405, Length=277, Percent_Identity=32.4909747292419, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=27.5092936802974, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=30.2583025830258, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17559104, Length=276, Percent_Identity=29.7101449275362, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562904, Length=276, Percent_Identity=29.7101449275362, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17564282, Length=199, Percent_Identity=32.1608040201005, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17560332, Length=274, Percent_Identity=30.6569343065693, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560150, Length=270, Percent_Identity=30.3703703703704, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71997099, Length=240, Percent_Identity=30.8333333333333, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71982365, Length=196, Percent_Identity=32.6530612244898, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI86565303, Length=261, Percent_Identity=28.3524904214559, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17563726, Length=270, Percent_Identity=28.8888888888889, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17538486, Length=277, Percent_Identity=29.2418772563177, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562990, Length=270, Percent_Identity=31.4814814814815, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17565030, Length=276, Percent_Identity=29.7101449275362, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI72001658, Length=209, Percent_Identity=30.1435406698565, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=30.4568527918782, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193203115, Length=200, Percent_Identity=28.5, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193203117, Length=199, Percent_Identity=28.1407035175879, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=28.515625, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538182, Length=269, Percent_Identity=29.7397769516729, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=25.8823529411765, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567345, Length=202, Percent_Identity=25.2475247524752, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17508651, Length=261, Percent_Identity=27.2030651340996, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17561272, Length=257, Percent_Identity=29.9610894941634, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71997402, Length=202, Percent_Identity=26.7326732673267, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17532791, Length=150, Percent_Identity=35.3333333333333, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17558628, Length=196, Percent_Identity=29.0816326530612, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=204, Percent_Identity=32.843137254902, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6322861, Length=195, Percent_Identity=29.2307692307692, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=36.2204724409449, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=36.4705882352941, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=35.408560311284, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=32.9411764705882, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=35.0194552529183, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=32.5490196078431, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24643142, Length=255, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI24644337, Length=167, Percent_Identity=34.7305389221557, Blast_Score=94, Evalue=8e-20, Organism=Drosophila melanogaster, GI24640492, Length=210, Percent_Identity=26.1904761904762, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI161076371, Length=208, Percent_Identity=33.6538461538462, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17737361, Length=260, Percent_Identity=28.8461538461538, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI21357673, Length=255, Percent_Identity=27.4509803921569, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI18859837, Length=197, Percent_Identity=31.9796954314721, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI21358495, Length=202, Percent_Identity=25.7425742574257, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI28573296, Length=234, Percent_Identity=30.3418803418803, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19921754, Length=219, Percent_Identity=30.5936073059361, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45554248, Length=215, Percent_Identity=33.0232558139535, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640117, Length=215, Percent_Identity=33.0232558139535, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281364892, Length=216, Percent_Identity=28.2407407407407, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI22024069, Length=210, Percent_Identity=29.5238095238095, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24649181, Length=201, Percent_Identity=28.3582089552239, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24647946, Length=210, Percent_Identity=30, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 27216; Mature: 27216
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNEGKAFL CCCCCCCEEEEECCCCCHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEE IEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAV EECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHEE NIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE ECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHECCCCCCCCHHEEHHHHHHCCC RGITVNTIMPGYTKTDINAKLLDDPEIRNFAANSSVFGRIGQVEDIADAVAFLAASDSRW CCCEEEEECCCCEECCCCEEECCCCHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCE VTGQIIDVSGGFCL EEEEEEEECCCCCC >Mature Secondary Structure MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNEGKAFL CCCCCCCEEEEECCCCCHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEE IEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAV EECCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHEE NIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE ECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHECCCCCCCCHHEEHHHHHHCCC RGITVNTIMPGYTKTDINAKLLDDPEIRNFAANSSVFGRIGQVEDIADAVAFLAASDSRW CCCEEEEECCCCEECCCCEEECCCCHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCE VTGQIIDVSGGFCL EEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8868443 [H]