Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
---|---|
Accession | NC_012578 |
Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is plsY
Identifier: 227080706
GI number: 227080706
Start: 514644
End: 515270
Strand: Reverse
Name: plsY
Synonym: VCM66_0481
Alternate gene names: 227080706
Gene position: 515270-514644 (Counterclockwise)
Preceding gene: 227080718
Following gene: 227080703
Centisome position: 17.81
GC content: 52.31
Gene sequence:
>627_bases ATGACTCCATTGGCGCTCAGCATGATCATTTTTGCCTATCTACTGGGGTCAATTTCCAGTGCGGTGTTGATTTGTCGTGT TCTGCGTCTCCCCGATCCGCGTAACGTGGGCTCACAAAACCCCGGAGCCACCAATGTACTGCGCATCGGCGGCAAAAAAG CCGCAGTGGCCGTTTTATTGTGTGACATGCTCAAAGGCACCATCCCAGTTTGGGGCGGCTACTTCCTCAATATTGAACCT TTTATGTTGGGATTGGTGGCAATCGCCGCCTGCCTTGGTCACATGTACCCGATTTTTTTCCATTTCAAAGGTGGAAAAGG CGTGGCAACCGCGTTAGGTGCAATCGCACCGATTGGGCTCGATTTAACCGCTATGGTGATGGCCACATGGCTTGTCGTTG TCGTACTGTTTCGCTACTCGTCGCTTGCAGCCTTAGTCACTGTGTTGCTCGCGCCCCTCTACACTTGGCTGATTAAGCCA CAGTACACGCTTCCAGTTGCCATGTTGTGCTGTTTGATTGTGCTGCGCCATCATCAAAACGTGAAGCGCCTGTTTGCGGG TACCGAGCCCAAGGTCGGTGAAAAGAATAAGAAGCCGAGCGATGATGAAGAGAGCCGCGTCGTGTAA
Upstream 100 bases:
>100_bases CTGTTCAAGATGCTAAATCCTAAAAGATTTTTTCTTATTCAACAGGGAATACAAATACTTATTCGAGATAACTTTTCGAA ACACGCAGTTTGAGGCTGTT
Downstream 100 bases:
>100_bases CCGTGCGCGGCTCAATAGGTGATCGCCATTTCATCAATGGCAGAAAAATCAATATACGGTTGCTAAGAACGTTTGCAGGT GGTGTGTCACCGATTCTGCC
Product: putative glycerol-3-phosphate acyltransferase PlsY
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTPLALSMIIFAYLLGSISSAVLICRVLRLPDPRNVGSQNPGATNVLRIGGKKAAVAVLLCDMLKGTIPVWGGYFLNIEP FMLGLVAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGLDLTAMVMATWLVVVVLFRYSSLAALVTVLLAPLYTWLIKP QYTLPVAMLCCLIVLRHHQNVKRLFAGTEPKVGEKNKKPSDDEESRVV
Sequences:
>Translated_208_residues MTPLALSMIIFAYLLGSISSAVLICRVLRLPDPRNVGSQNPGATNVLRIGGKKAAVAVLLCDMLKGTIPVWGGYFLNIEP FMLGLVAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGLDLTAMVMATWLVVVVLFRYSSLAALVTVLLAPLYTWLIKP QYTLPVAMLCCLIVLRHHQNVKRLFAGTEPKVGEKNKKPSDDEESRVV >Mature_207_residues TPLALSMIIFAYLLGSISSAVLICRVLRLPDPRNVGSQNPGATNVLRIGGKKAAVAVLLCDMLKGTIPVWGGYFLNIEPF MLGLVAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGLDLTAMVMATWLVVVVLFRYSSLAALVTVLLAPLYTWLIKPQ YTLPVAMLCCLIVLRHHQNVKRLFAGTEPKVGEKNKKPSDDEESRVV
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=203, Percent_Identity=62.0689655172414, Blast_Score=265, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_VIBC3 (A5F9D1)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - STRING: A5F9D1 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0051 - eggNOG: COG0344 - HOGENOM: HBG734487 - OMA: HNPVAWA - ProtClustDB: PRK00220 - BioCyc: VCHO345073:VC0395_A0051-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 22476; Mature: 22345
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x250c55f4)-; HASH(0x251238a0)-; HASH(0x25555e6c)-; HASH(0x256f94d8)-; HASH(0x23a2fb80)-;
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLALSMIIFAYLLGSISSAVLICRVLRLPDPRNVGSQNPGATNVLRIGGKKAAVAVLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH CDMLKGTIPVWGGYFLNIEPFMLGLVAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGL HHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCC DLTAMVMATWLVVVVLFRYSSLAALVTVLLAPLYTWLIKPQYTLPVAMLCCLIVLRHHQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VKRLFAGTEPKVGEKNKKPSDDEESRVV HHHHHCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure TPLALSMIIFAYLLGSISSAVLICRVLRLPDPRNVGSQNPGATNVLRIGGKKAAVAVLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH CDMLKGTIPVWGGYFLNIEPFMLGLVAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGL HHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCC DLTAMVMATWLVVVVLFRYSSLAALVTVLLAPLYTWLIKPQYTLPVAMLCCLIVLRHHQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VKRLFAGTEPKVGEKNKKPSDDEESRVV HHHHHCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA