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The map label for this gene is yggA [H]

Identifier: 227080691

GI number: 227080691

Start: 496473

End: 497108

Strand: Reverse

Name: yggA [H]

Synonym: VCM66_0466

Alternate gene names: 227080691

Gene position: 497108-496473 (Counterclockwise)

Preceding gene: 227080695

Following gene: 227080684

Centisome position: 17.19

GC content: 45.13

Gene sequence:

>636_bases
ATGAACTGGTGGATTCTGCTACAAGGATTCAGCTTGGGAGCGACCATGATTATTCCCATTGGTGCTCAAAATGCTTATGT
ATTAAATCAAGGGATTAAACGTCATCACCACTTAACCACCGCAGCCACTTGTGGGGTGCTGGATATGATTTTTATCACGC
TGGGGATTTTTGGCGGTGGTGCTCTCATCTCGCAAAATACCAGCTTGTTAATTGGTGTCACTTTGGCTGGAATTCTTTTT
TTGTGTGGTTATGGGTTTCTTTCTTTGCGTGCTGCGCTCAAACCGCCCCAAGCATCTGAATCCACGGCAAATCCGATGGC
TGCAGGACGTAAAGCGGTCATTTTTGGTGCCTTTGCGGTCACTGTGTTTAACCCGCATCTCTATTTGGATACCGTGGTGA
TCTTAGGGTCAATCGGAGGCCAATTCCAAGGTGATGAGCGTATCTCATTTGCCATTGGTACCATTCTCGCCTCATTCGTG
TGGTTTTTTACTCTTTCACTCGGAGCAGCAAAATTGAGCACCACACTCTCTAAACCTAGAGTCAGACAAGTGATTGATAT
GGCAGTCGCAGCGATGATGTTCATTATTGCCTTCGCGTTGACTAAGAACTTATATCTCAATCACTGGTTAAATTAA

Upstream 100 bases:

>100_bases
ACCTCAAATTATTATCTTGCTCAGCCTATCCCTTCGATCTGACGTTGCAACTTCAAATCGGAACGAAATCACACTCCAAT
CATGCGGTATGAGGTAAAAA

Downstream 100 bases:

>100_bases
GCTATTACCGACAAAAAAGCGGAGTAAACACTCCGCTTTGGTATTTTGTATATAGCAAAACCATTAATTGATTTTGTTCA
GATGCACATCCATTTGTGGG

Product: LysE/YggA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNWWILLQGFSLGATMIIPIGAQNAYVLNQGIKRHHHLTTAATCGVLDMIFITLGIFGGGALISQNTSLLIGVTLAGILF
LCGYGFLSLRAALKPPQASESTANPMAAGRKAVIFGAFAVTVFNPHLYLDTVVILGSIGGQFQGDERISFAIGTILASFV
WFFTLSLGAAKLSTTLSKPRVRQVIDMAVAAMMFIIAFALTKNLYLNHWLN

Sequences:

>Translated_211_residues
MNWWILLQGFSLGATMIIPIGAQNAYVLNQGIKRHHHLTTAATCGVLDMIFITLGIFGGGALISQNTSLLIGVTLAGILF
LCGYGFLSLRAALKPPQASESTANPMAAGRKAVIFGAFAVTVFNPHLYLDTVVILGSIGGQFQGDERISFAIGTILASFV
WFFTLSLGAAKLSTTLSKPRVRQVIDMAVAAMMFIIAFALTKNLYLNHWLN
>Mature_211_residues
MNWWILLQGFSLGATMIIPIGAQNAYVLNQGIKRHHHLTTAATCGVLDMIFITLGIFGGGALISQNTSLLIGVTLAGILF
LCGYGFLSLRAALKPPQASESTANPMAAGRKAVIFGAFAVTVFNPHLYLDTVVILGSIGGQFQGDERISFAIGTILASFV
WFFTLSLGAAKLSTTLSKPRVRQVIDMAVAAMMFIIAFALTKNLYLNHWLN

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=196, Percent_Identity=44.3877551020408, Blast_Score=160, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22651; Mature: 22651

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWWILLQGFSLGATMIIPIGAQNAYVLNQGIKRHHHLTTAATCGVLDMIFITLGIFGGG
CCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALISQNTSLLIGVTLAGILFLCGYGFLSLRAALKPPQASESTANPMAAGRKAVIFGAFAV
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEHEEE
TVFNPHLYLDTVVILGSIGGQFQGDERISFAIGTILASFVWFFTLSLGAAKLSTTLSKPR
EHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VRQVIDMAVAAMMFIIAFALTKNLYLNHWLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNWWILLQGFSLGATMIIPIGAQNAYVLNQGIKRHHHLTTAATCGVLDMIFITLGIFGGG
CCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALISQNTSLLIGVTLAGILFLCGYGFLSLRAALKPPQASESTANPMAAGRKAVIFGAFAV
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEHEEE
TVFNPHLYLDTVVILGSIGGQFQGDERISFAIGTILASFVWFFTLSLGAAKLSTTLSKPR
EHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VRQVIDMAVAAMMFIIAFALTKNLYLNHWLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]