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The map label for this gene is mcp4 [H]

Identifier: 227080496

GI number: 227080496

Start: 274079

End: 275749

Strand: Reverse

Name: mcp4 [H]

Synonym: VCM66_0267

Alternate gene names: 227080496

Gene position: 275749-274079 (Counterclockwise)

Preceding gene: 227080497

Following gene: 227080490

Centisome position: 9.53

GC content: 51.35

Gene sequence:

>1671_bases
ATGCGTGTCATATCTCAAGGAGTGATGTTTATGACTTCCGTTAGCCTGCGCCACCTCTCAATCCGTAATCGCTTATTTCT
GCTCACTGTGGTGATTCTGGTACTGCTGGCAATACCGTTTGCCATTATGGTCAAAGATTATCGACACGACCTGATGCTAG
AAAAACAAGTTCAAACTCAGCATTTAGTCGAAAGTGCTTACACACTACTTGAGCACTATGCTCAGCAAGCTACCCAAGGC
ACACTCACGACCGAACAAGCGCAAAACACGGCAAAACAAGCGATAGCTCAATTGCGTTATGGCGCGAACGACTACTTCTG
GATTAATGATGCGCAGCCTGCCATGGTGATGCATCCGATGAAACCGGATTTGAATGGCAAAGATCTGCGCAGCTTTAAAG
ACCCGAACGGCAAAGCTTTATTCGTCGAAATGGTCAATGTCACCCAAAGAAATCAGCAAGGTGTAGTCGAGTATCAGTGG
CCTAAACCGGGTGCCGAACAACCCGTCGATAAAGTCTCTTACGTCAAACTGTTTAAACCTTGGGGCTGGATTATCGGCAC
AGGCATCTACGTCGATGATGTGAATGCGCTGGTGATGCAGCGCCTGAGCTCAATACTGGTTTGGGTTGTGGGCACGCTGC
TGGTATTGATTGTGCTTGCCAGCTTGATTGGGCGCAGCATCACTCAACCTTGCGAAGAGACACTCGCAACGCTGAAAAAT
ATCGCCCAAGGTGAAGGGGATCTTACTCGCCAATTAACCGTGACGGGAAAAGATGAACTGGCACAAATCGCGCAAGCCTT
TAACCTGTTCACCAATAAAATTCGACATATTATTCAAGAAATTACTCCAATCACCGAGAGCGTGACGGGCTCTGCCGATG
AACTGACTCAAGTAGCGCAAAGTGCATCCAGCAAAGCGTATGACCAGCACCAAGCGGTGGATACCGTCGCTTCCGCCATG
AATCAGTTGCATGCGTCCAATCAAGAAGTCGCGCAATCTGCCCATCAGGCTGAACAAGCGGCGCACAGTGCCAATCAAGC
GGCCAGCCAAGGGCGCGAAATGATCACACTCACCTCGACTCAAATGCAGAGCTTGCGCGATCAATTGACCCGTACCGAAC
AAGAAACTCAAGTTCTGGCCAGTGAAACGCAATCGGTCAGTGCAGTCTTGGAAGTGATCCGTGGTGTGGCCGAGCAGACC
AACTTACTGGCACTGAATGCGGCGATTGAAGCGGCGCGTGCTGGTGAGCAAGGCCGCGGCTTTGCCGTGGTCGCCGATGA
AGTGCGCACCCTCGCCACTCGCACCCAAGCCAGCACCAATGAGATTGAGCAAATCATTGCTCAGTTACAGAAAAAAGCGC
AGAGCGTCAGCCAATCCATGACGCAAACCCAGCAGCAATCACGGGTGACGCAACAGCAAGCCGAGCAAGCGCAGCAGATG
CTCAATGAGATTGAAGCGCAGATCAAAACCATCTTGTCCTTCAACCAACATATCGCAGGCGCGAGCGCCCAGCAATCAGA
GGCTACCGACGAGATTACCCGTAACCTCACCCAGATTGCCGAGCACAGCACCCAAGCCTCAGCTCAAGCTAACCAAGTGG
CAGCCGCCAGTGAACAGTTGATGGAAAATGGCCAGCATCTGGCTCGCAGCTTAGCGGTGTTTAAAATCTGA

Upstream 100 bases:

>100_bases
AATTCGACATCGTGCACAACTTCACCACTTTGCCTCTTTAGTCGCATTTACCGCTCTGAAAACAATCTGTTACAGTCTTG
CGTACCATGAAATATTCATC

Downstream 100 bases:

>100_bases
TCCCGCGACGACGCTTTTCACCTAAATTGCACCATGAAAAAAGAGAGAGCCGTGAGGCTCTCTCTGTGTATCAGCGTCCA
TTGGGGAGTTACGCTGTCTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MRVISQGVMFMTSVSLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQQATQG
TLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQW
PKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKN
IAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAM
NQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQT
NLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQM
LNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI

Sequences:

>Translated_556_residues
MRVISQGVMFMTSVSLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQQATQG
TLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQW
PKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKN
IAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAM
NQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQT
NLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQM
LNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI
>Mature_556_residues
MRVISQGVMFMTSVSLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQQATQG
TLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQW
PKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKN
IAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAM
NQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQT
NLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQM
LNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=373, Percent_Identity=29.4906166219839, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1788195, Length=290, Percent_Identity=31.3793103448276, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1788194, Length=356, Percent_Identity=29.4943820224719, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787690, Length=366, Percent_Identity=27.0491803278689, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789453, Length=331, Percent_Identity=29.0030211480363, Blast_Score=113, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 61205; Mature: 61205

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISQGVMFMTSVSLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLVESAYTLLEHYAQQATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCC
KPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKP
CCCCCCCHHHHCCCCCCCEEEEEHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCC
WGWIIGTGIYVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKN
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQ
HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SASSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTST
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
QMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
FAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQM
EEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MENGQHLARSLAVFKI
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVISQGVMFMTSVSLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLVESAYTLLEHYAQQATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCC
KPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKP
CCCCCCCHHHHCCCCCCCEEEEEHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCC
WGWIIGTGIYVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKN
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQ
HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SASSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTST
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
QMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
FAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQM
EEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MENGQHLARSLAVFKI
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]