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The map label for this gene is amsG [H]

Identifier: 227080478

GI number: 227080478

Start: 253098

End: 253652

Strand: Direct

Name: amsG [H]

Synonym: VCM66_0248

Alternate gene names: 227080478

Gene position: 253098-253652 (Clockwise)

Preceding gene: 227080477

Following gene: 227080479

Centisome position: 8.75

GC content: 43.78

Gene sequence:

>555_bases
ATGGTTATTCGATTTCTTGATTTTATTTTTGCTCTAGCTGGGCTGTTGTTACTCTGGCCTGTGTTATTGATTGTGTGCAT
TTTGGGCTATTTTGATACTGGCTCCCCTATTTTCTGCCAACAGCGAGTCGGTAAGAATCAGCGTCCATTTACCCTCATTA
AATTTCGAACCATGCCAAAAAATACGGCGTCGGTGGCAACCCATTTGGTTGGTGCTTCTTCTGTCACTAGGCTCGGTCAG
TTTCTGCGCAAGACCAAGCTTGATGAGCTTCCACAATTAATCAATGTGCTGAAGGGTGAAATGAGTTTAGTTGGGCCTCG
ACCTTGCTTGTTTAATCAACAAGATCTGATTGCTGAACGAGAATCCCGTGGAGTGTTTACCGTTCTCCCTGGCATTACGG
GACTGGCTCAAGTAAACGAAGTGGATATGTCGACACCAGTAAAGCTTGCAGAGCTTGATCAACAGATGATTCAAACGCTG
AATTTAAAAAACTACTTTACGTATATCATTCAGACCGTTTTAGGCAAGGGAGCGGGTGATCGTGTTAAGCCATAA

Upstream 100 bases:

>100_bases
ACCCAAAAAACACTACACTGGTCGCCACCTGTGAGTTTCGAACAGGGCATAGCGCGCACGGTAAATTTCTACTTATCTCA
ATCATCTAAGTGATAAAGAC

Downstream 100 bases:

>100_bases
CAATCAAGCCGTCCAGTTGGACGGCTCGATTGTTATGGCTTTTACTCTTGTCGATGTAGTTATTTACGCACTGATTTGTC
GATGGGCTGTTGCTTATCGC

Product: putative galactosyl-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MVIRFLDFIFALAGLLLLWPVLLIVCILGYFDTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVATHLVGASSVTRLGQ
FLRKTKLDELPQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLAELDQQMIQTL
NLKNYFTYIIQTVLGKGAGDRVKP

Sequences:

>Translated_184_residues
MVIRFLDFIFALAGLLLLWPVLLIVCILGYFDTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVATHLVGASSVTRLGQ
FLRKTKLDELPQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLAELDQQMIQTL
NLKNYFTYIIQTVLGKGAGDRVKP
>Mature_184_residues
MVIRFLDFIFALAGLLLLWPVLLIVCILGYFDTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVATHLVGASSVTRLGQ
FLRKTKLDELPQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLAELDQQMIQTL
NLKNYFTYIIQTVLGKGAGDRVKP

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=191, Percent_Identity=37.17277486911, Blast_Score=88, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 20509; Mature: 20509

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIRFLDFIFALAGLLLLWPVLLIVCILGYFDTGSPIFCQQRVGKNQRPFTLIKFRTMPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEECCCC
NTASVATHLVGASSVTRLGQFLRKTKLDELPQLINVLKGEMSLVGPRPCLFNQQDLIAER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ESRGVFTVLPGITGLAQVNEVDMSTPVKLAELDQQMIQTLNLKNYFTYIIQTVLGKGAGD
HCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVKP
CCCC
>Mature Secondary Structure
MVIRFLDFIFALAGLLLLWPVLLIVCILGYFDTGSPIFCQQRVGKNQRPFTLIKFRTMPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEECCCC
NTASVATHLVGASSVTRLGQFLRKTKLDELPQLINVLKGEMSLVGPRPCLFNQQDLIAER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ESRGVFTVLPGITGLAQVNEVDMSTPVKLAELDQQMIQTLNLKNYFTYIIQTVLGKGAGD
HCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVKP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]